Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5181 |
Symbol | |
ID | 3716771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5827109 |
End bp | 5827996 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | RarD protein |
Protein accession | YP_350909 |
Protein GI | 77461402 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000181331 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.141075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGCCG CCAACCCGCG TCGCGGGTAC ATTCTGGGCC TCAGCGCCTA CATCATCTGG GGACTGTTCC CGCTCTACTT CAAAGCCATC GCCGAAGTGC CGGCGGTGGA AATCATCATT CATCGAGTGC TGTGGTCGGC GCTGTTCGGC GCGCTGCTGT TGATGGTGTG GAAGCATCCC GGCTGGTGGC AGGAACTGCG CGACAACCCG AAACGCCTGG CGATTCTTGC GCTCAGCGGC ACCTTGATCG CGGCCAACTG GCTGACCTAC GTGTGGTCGG TGAACAACGG CCGGATGCTG GAAGCGAGCC TCGGTTATTA CATCAACCCG CTGGTGAACG TGCTACTGGG CATGCTGATC CTTGGCGAAC GCTTGCGCCG CATGCAGTGG CTGGCGGTCG GTCTGGCGGC TATCGGTGTG GCGCAGCAGG TGTGGCAGGT CGGCAGCCTG CCGTGGGTAT CGCTGGTGCT GGCGCTGACC TTCGGTTTCT ACGGGCTGAT CCGCAAGCAG GCGCCGATCA AGGCGTTGCC GGGGCTGGTG GTGGAAACCT GGATGCTGGT GCCGATCGCC CTCGCGTGGC TGCTGTTCAA TCCGACCGCC ACCAGCGCTC AGGCCGAGTT CTGGACCACC TCCGAAGCCT GGTGGCTGGT GGCAGCCGGT CCGGTGACGC TGGTGCCGCT GGTGTGCTTC AACGCGGCCG CGCGGCATCT GCCTTACACC ACCCTCGGCT TCCTGCAATA CCTGGCGCCG ACGCTGGTGC TGCTGCAAGC CGTGCTGCTG TTCGGCGAGC ACTTGTCGTC CAGCACACTG ATCGCCTTCA TGTTTATCTG GGCCGGTCTG GCGGTGTACA GCGTCGATGC TTGGATGAGT CTGCGTCGGC GCAGCTGA
|
Protein sequence | MQAANPRRGY ILGLSAYIIW GLFPLYFKAI AEVPAVEIII HRVLWSALFG ALLLMVWKHP GWWQELRDNP KRLAILALSG TLIAANWLTY VWSVNNGRML EASLGYYINP LVNVLLGMLI LGERLRRMQW LAVGLAAIGV AQQVWQVGSL PWVSLVLALT FGFYGLIRKQ APIKALPGLV VETWMLVPIA LAWLLFNPTA TSAQAEFWTT SEAWWLVAAG PVTLVPLVCF NAAARHLPYT TLGFLQYLAP TLVLLQAVLL FGEHLSSSTL IAFMFIWAGL AVYSVDAWMS LRRRS
|
| |