Gene Pfl01_5153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5153 
Symbol 
ID3716919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5793893 
End bp5794354 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID 
ProductAsnC family transcriptional regulator 
Protein accessionYP_350881 
Protein GI77461374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.462217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA TCGCCTCCAC AGGTCTTGAT GAAATCGACC GCCAGCTGAT CGCAGCCCTG 
CAAATCAACG CCCGCGAAAG CGTGGCGATG CTGGCCCGGC AATTGGGGAT CGCCCGCACG
ACCGTGACTT CACGACTGGC GCGGCTGGAA AAGGCCAAAG TCATCACCGG CTACAGCGTG
CGTCTGGGCC AGCGCGTGGT GGACGGCGGA TTGCAGGCTT ACGTCGGGAT CAAGGTGCAG
CCACGCTCCG GCAAAGAGGT GTTGCGCCGT TTGAGCGCAA TGGCTCAGGT GCAGCAATTG
TGCGCGGTGA GTGGCGAATT CGATTATGTG GCGTGGCTGC GGACCGATTC GCCGGAGCAG
CTTGATCAAC TTCTGGATCA GATCGGCAGC GTAGACGGTG TGGAGAAAAC CACGACCTCG
ATCATTCTCA GCAGCAAGAT TGATCGCGGC CATCCAGTCT GA
 
Protein sequence
MSKIASTGLD EIDRQLIAAL QINARESVAM LARQLGIART TVTSRLARLE KAKVITGYSV 
RLGQRVVDGG LQAYVGIKVQ PRSGKEVLRR LSAMAQVQQL CAVSGEFDYV AWLRTDSPEQ
LDQLLDQIGS VDGVEKTTTS IILSSKIDRG HPV