Gene Pfl01_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5143 
Symbol 
ID3717274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5780340 
End bp5780858 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content59% 
IMG OID 
Product7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
Protein accessionYP_350871 
Protein GI77461364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGA CCCAGGTCTA TCTCGGGCTC GGTAGCAATA TCGAGCGCGA AACCCATTTG 
CAGGCCGGTC TGGATGCCTT GTCCACGTTT CTGGTGGATA TACGCTGTTC GCCTGTGTTC
GAAAGCCAGC CGGTGGGAAT CAAGAGCGGG CCGTTCTTCA ACTTCGTGGT GTCGGCGTTC
ACCGATCTGC CGTTGATCGA GCTGGATCGC CGCTTGAAGT TCATTGAAGC GGACAACGGT
CGTTATGCGC CGGATCGCAA GGGCTTGCCG CTGGACATCG ACGTGTTGTT GTACGGCGAT
CTGGCGGGCA ACTTCGACGG GCTGATCCTG CCTCGTGCGG AAATCCTGAA AAATGCCTTT
GTGCTGTGGC CGCTGTCGCT GATTGCGCCG GATCGGGTGC ATCCCGGTGC AGGAAAAAGC
TTTGCCACGT TGTGGGCCGA AGCGCAGATC GATCAGGTGC TGGCACCGGT CGGATTCGAG
TGGCGCGGTA TTCAGCTCAC GCCTTCAGAT CTGTCTTGA
 
Protein sequence
MPLTQVYLGL GSNIERETHL QAGLDALSTF LVDIRCSPVF ESQPVGIKSG PFFNFVVSAF 
TDLPLIELDR RLKFIEADNG RYAPDRKGLP LDIDVLLYGD LAGNFDGLIL PRAEILKNAF
VLWPLSLIAP DRVHPGAGKS FATLWAEAQI DQVLAPVGFE WRGIQLTPSD LS