Gene Pfl01_5140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5140 
Symbol 
ID3717271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5776168 
End bp5777439 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350868 
Protein GI77461361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATG TGATCGACCG ACGTCTCAAT GGCAAGAACA AGAGCACGGT GAACCGTCAG 
CGCTTCCTGC GGCGTTACCG TGACCACATC AAGAAGGCTG TCGAAGAGGC GGTCAGCCGG
CGTTCCATCA CCGATATGGA GCACGGCGAG CAGATCAGCA TCCCTGGTCG CGATATCGAC
GAACCGGTGC TTCACCATGG TCGCGGCGGC AAGCAGACCG TGGTTCATCC CGGCAACAAG
GAATTCACCG CTGGCGAACA CATCGCGCGT CCGCCGGGAG GTGGTGGTGG CCGTGGGCCG
GGCAAGGCCG GCAACTCCGG TGAAGGCATG GACGAGTTCG TCTTCCAGAT CACCCAGGAA
GAATTCCTCG AATTCATGTT CGAGGACCTC GAACTGCCCA ACCTGGTCAA GCGCAACCTG
ACCGGCACCG ACACTTTCAA GACCGTACGT GCGGGGATCA GCAACGAGGG CAACCCTTCG
CGGATCAACA TTATCCGTAC CCTGCGCTCG GCCCATGCCC GGCGCATTGC GTTATCGGGC
AGCAGCCGCG CCAAACTGCG CGAGGTCAAG GAGGAACTGG CGCGACTCAA ACGCGAAGAA
CCGGACAACT TCGGGGATAT TCAGGATCTT GAAGCAGAAA TCGAACGACT CAGTGCGCGT
ATCCATCGCG TGCCGTTTCT CGATACGTTC GATTTGAAAT ACAACCTGCT GGTCAAGCAA
CCCAATCCAA GCTCCAAAGC CGTGATGTTC TGCCTGATGG ACGTTTCCGG CTCCATGACC
CAGGCAACCA AGGACATCGC CAAGCGGTTT TTCATCTTGT TGTACCTTTT CCTCAAGCGG
AACTACGACA AGATCGACGT GGTGTTCATC CGCCACCACA CCAGCGCCCG CGAAGTCGAC
GAAGAGGAGT TCTTCTATTC CCGCGAGACC GGCGGCACCA TCGTTTCCAG CGCCTTGAAA
CTGATGCAGG AGATCATGGC CGAGCGCTAC CCGAGCAATG AATGGAACAT CTACGCCGCC
CAGGCTTCCG ACGGCGACAA CTGGAACGAC GACTCGCCGA TCTGCCGCGA CATCCTGATC
AACCAGATCA TGCCGTTCGT GCAGTACTAC ACTTACGTGG AGATCACCCC GCGCGAACAT
CAGGCCTTGT GGTACGAATA CGAACGCATC GCCGAAGCTT TTTCCGACAC TTTTGCCCAG
CAACAACTGG TCTCGGCCGG GGATATCTAT CCGGTCTTCC GTGAACTCTT CCAGCGCAGG
TTAGTGACAT GA
 
Protein sequence
MSYVIDRRLN GKNKSTVNRQ RFLRRYRDHI KKAVEEAVSR RSITDMEHGE QISIPGRDID 
EPVLHHGRGG KQTVVHPGNK EFTAGEHIAR PPGGGGGRGP GKAGNSGEGM DEFVFQITQE
EFLEFMFEDL ELPNLVKRNL TGTDTFKTVR AGISNEGNPS RINIIRTLRS AHARRIALSG
SSRAKLREVK EELARLKREE PDNFGDIQDL EAEIERLSAR IHRVPFLDTF DLKYNLLVKQ
PNPSSKAVMF CLMDVSGSMT QATKDIAKRF FILLYLFLKR NYDKIDVVFI RHHTSAREVD
EEEFFYSRET GGTIVSSALK LMQEIMAERY PSNEWNIYAA QASDGDNWND DSPICRDILI
NQIMPFVQYY TYVEITPREH QALWYEYERI AEAFSDTFAQ QQLVSAGDIY PVFRELFQRR
LVT