Gene Pfl01_5139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5139 
Symbol 
ID3717270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5774040 
End bp5775962 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content56% 
IMG OID 
Productputative Serine protein kinase, PrkA 
Protein accessionYP_350867 
Protein GI77461360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCT TTAGCCACTT CCAACAACGC TTCGAGTCCA CACGCCAGGA AGAATTCTCC 
CTGCAGGAGT ACCTGGAACT GTGCAAAAAG GATCGCAGTG CCTACGTTTC CGCCGCCGAG
CGTCTGTTAA TGGCCATCGG CGAACCGGAA CTGCTCGACA CCTCGACCAA TTCGAGGCTG
TCGCGCATCT TTTCCAACAA GGTGATCCGC CGCTATCCGG CCTTTGAAGA CTTCCACGGG
ATGGAAGAAT GCATCGACCA GATCGTGTCG TATTTCCGCC ATGCCGCTCA GGGCCTGGAA
GAAAAGAAAC AGATCCTCTA TCTGCTCGGC CCTGTCGGCG GCGGTAAGTC GTCCCTGGCC
GAGAAGCTGA AACAACTGAT GGAAAAAGTG CCCTTCTATG CCATCAAGGG CTCGCCGGTA
TTCGAATCGC CACTGGGTCT GTTCAACGCC ACCGAAGATG GCGCGATCCT CGAGGAAGAC
TTTGGCATTC CACGGCGCTA CCTGAACACC ATCATGTCGC CATGGGCCAC CAAGCGCCTG
GCCGAATTCG GCGGAGACAT CAGCCAGTTC CGCGTGGTCA AGCTGTACCC GTCGATCCTC
AACCAGATCG CCGTGGCCAA GACCGAACCG GGTGACGAAA ACAACCAGGA CATCTCCGCG
CTGGTAGGCA AAGTCGATAT CCGCAAACTC GAAGAATTCC CGCAGAACGA TGCCGACGCC
TACAGCTACT CCGGTGCGCT GTGCCGGGCC AACCAGGGCC TGATGGAATT CGTCGAAATG
TTCAAGGCAC CGATCAAGGT GCTCCACCCA TTGCTGACTG CGACCCAGGA AGGCAACTAC
AACAGTACCG AAGGCCTCGG TGCGATTCCG TTCACCGGGA TTCTGCTGGC CCACTCCAAC
GAATCGGAGT GGCACACCTT CCGCAACAAC AAGAATAACG AAGCGTTCAT CGACCGGATC
TATATCGTCA AGGTGCCGTA CTGCCTGCGG GTCAGCGACG AGGTGAAGAT CTACGACAAG
CTGTTGTTCA ACAGCTCCCT GGCCAAGGCC CATTGCGCGC CGGACACCCT GAAGATGCTG
GCGCAGTTCA CCGTACTGTC ACGCCTGAAG GAGCCGGAAA ACTCCAACAT CTATTCGAAG
ATGCGCGTGT ATGACGGCGA AAATCTCAAG GACACCGATC CGAAGGCCAA GTCGATTCAG
GAATACCGCG ATGCGGCGGG CGTCGACGAA GGCATGAACG GTCTGTCGAC CCGGTTCGCT
TTCAAGATTC TGTCCAAGGT CTTCAACTTC GATCCGCACG AAATTGCCGC CAACCCGGTA
CACCTGCTCT ATGTGCTGGA ACAGCAGATT GAACAGGAAC AGTTCCAGGC CGAAACCCGC
GAGCGCTATC TGCGTTACCT GAAAGAGTAC CTGGCGCCGC GTTATATCGA ATTCATCGGC
AAGGAGATCC AGACCGCCTA CCTCGAGTCT TACAGCGAGT ACGGCCAGAA CATCTTCGAC
CGCTACGTGC TGTATGCGGA CTTCTGGATT CAGGATCAGG AATACCGCGA TCCGGAAACC
GGCGAGATCC TCAATCGCGT CGCCCTCAAC GAGGAGCTGG AAAAGATCGA GAAACCGGCC
GGCATCAGCA ATCCGAAGGA CTTCCGCAAC GAAATCGTCA ACTTCGTGTT GCGTGCCCGG
GCCAACAACA ACGGCAAGAA CCCGACCTGG CTCAGCTACG AAAAACTGCG GGTGGTCATC
GAGAAGAAAA TGTTCTCGAA CACCGAGGAT CTGCTGCCAG TCATCAGCTT CAACGCCAAG
GCCAGCAAAG AGGATCAGCA GAAACACAAC GACTTCGTTA CACGAATGGT CGAACGCGGC
TACACCGACA AACAGGTACG ACTGCTTTCT GAGTGGTATC TGCGGGTCAG AAAATCACAG
TAA
 
Protein sequence
MSIFSHFQQR FESTRQEEFS LQEYLELCKK DRSAYVSAAE RLLMAIGEPE LLDTSTNSRL 
SRIFSNKVIR RYPAFEDFHG MEECIDQIVS YFRHAAQGLE EKKQILYLLG PVGGGKSSLA
EKLKQLMEKV PFYAIKGSPV FESPLGLFNA TEDGAILEED FGIPRRYLNT IMSPWATKRL
AEFGGDISQF RVVKLYPSIL NQIAVAKTEP GDENNQDISA LVGKVDIRKL EEFPQNDADA
YSYSGALCRA NQGLMEFVEM FKAPIKVLHP LLTATQEGNY NSTEGLGAIP FTGILLAHSN
ESEWHTFRNN KNNEAFIDRI YIVKVPYCLR VSDEVKIYDK LLFNSSLAKA HCAPDTLKML
AQFTVLSRLK EPENSNIYSK MRVYDGENLK DTDPKAKSIQ EYRDAAGVDE GMNGLSTRFA
FKILSKVFNF DPHEIAANPV HLLYVLEQQI EQEQFQAETR ERYLRYLKEY LAPRYIEFIG
KEIQTAYLES YSEYGQNIFD RYVLYADFWI QDQEYRDPET GEILNRVALN EELEKIEKPA
GISNPKDFRN EIVNFVLRAR ANNNGKNPTW LSYEKLRVVI EKKMFSNTED LLPVISFNAK
ASKEDQQKHN DFVTRMVERG YTDKQVRLLS EWYLRVRKSQ