Gene Pfl01_5134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5134 
SymbolpdxA 
ID3717265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5770198 
End bp5771187 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content66% 
IMG OID 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_350862 
Protein GI77461355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCCA AGCGTTTCGC GCTGACACCC GGCGAACCGG CCGGCATCGG TCCCGACCTG 
TGCCTGCTGC TCGCCTCGCA AGCCCAGCCA CACCCCCTGA TTGCCATCAC CAGCCGCGAC
CTGCTCCAAG AGCGGGCCGC GCAGCTGGGG CTGGCTGTCA GCTTGCTGGA AGTGGCGCCT
GACAACTGGC CGGACGCTCC CGCGCCCGCC AACAGCCTGT ACGTCTGGGA CACCCCGCTC
AGCGCCCCCG TGGTCGCCGG GCAACTGGAC AAGGCCAACG CCGCATTCGT CCTCGAAACC
CTGACCCGCG CCGGCAATGG CTGTCTGAAC GGCGACTTCG CCGGGATGAT CACCGCGCCT
GTGCACAAAG GCGTGATCAA CGAATCGGGC ATCGCGTTTT CCGGTCACAC CGAGTTTCTC
GCCGACCTGA CCCACACCGC CCAAGTGGTG ATGATGCTCG CCACCCGCGG TTTGCGCGTG
GCGCTGGTCA CCACTCACCT GCCCTTGCGC GACATTGCCG ATGCGATCAC GCCGGAGCGC
CTGGAACGGG TCACGCGGAT TCTGCACGCC GACCTGCAAC AAAAATTCGG CATCGCCCAA
CCGCGTATCC TGGTCTGCGG ACTCAACCCG CACGCCGGCG AAGGCGGACA CCTGGGCCAT
GAAGAAATCG ACATCATCGA ACCCACATTG GAGCGCCTGC GCGGCGAGGG CATGGACCTT
CGTGGCCCGC TGCCTGCCGA CACTCTGTTT ACCCCCAAAT ATCTGGAGCA CTGTGACGCA
GTGCTGGCGA TGTACCACGA CCAGGGCCTG CCCGTGCTGA AGTACAAAGG CTTCGGCGCT
GCAGTCAACG TGACCCTGGG CCTGCCGATC ATCCGCACCT CGGTCGACCA TGGCACCGCC
CTGGATCTGG CCGGCAGCGG CAGGATCGAC ACCGGCAGCC TGGAAACCGC CCTGGAAACC
GCCTACCAGA TGGCCGAGAC CCGTTTATGA
 
Protein sequence
MKPKRFALTP GEPAGIGPDL CLLLASQAQP HPLIAITSRD LLQERAAQLG LAVSLLEVAP 
DNWPDAPAPA NSLYVWDTPL SAPVVAGQLD KANAAFVLET LTRAGNGCLN GDFAGMITAP
VHKGVINESG IAFSGHTEFL ADLTHTAQVV MMLATRGLRV ALVTTHLPLR DIADAITPER
LERVTRILHA DLQQKFGIAQ PRILVCGLNP HAGEGGHLGH EEIDIIEPTL ERLRGEGMDL
RGPLPADTLF TPKYLEHCDA VLAMYHDQGL PVLKYKGFGA AVNVTLGLPI IRTSVDHGTA
LDLAGSGRID TGSLETALET AYQMAETRL