Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5125 |
Symbol | |
ID | 3717043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5758005 |
End bp | 5759129 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | spermidine/putrescine ABC transporter ATP-binding subunit |
Protein accession | YP_350853 |
Protein GI | 77461346 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0754257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.720307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG TCGAATCAAA CGCAGGGGCC AGCGATGTGC TGGTCAGCTT TCGTGGAGTG CAGAAGAGCT ACGACGGCGA GAACCTGATC GTCAAAGACC TCAACCTGGA CATTCGCAAG GGCGAATTCC TCACCTTGCT CGGACCGTCC GGCTCCGGAA AGACCACCAG CCTGATGATG CTCGCCGGTT TCGAGACGCC GACCGCCGGC GAAATTCTCC TTGCCGGGCG GGCGATCAAC AACGTGCCGC CGCACAAGCG CGACATCGGC ATGGTGTTCC AGAACTACGC GCTGTTTCCG CACATGACCG TCGCCGAAAA CCTGGCGTTT CCGCTGACCG TACGCGGCCT GAACAAGAGC GACGTCAGCG ACAAGGTTAA GAAAGTCCTG AGCATGGTTC AGCTCGACGC GTTCGCATCG CGTTATCCGG CGCAGTTGTC CGGCGGCCAG CAACAACGTG TAGCACTGGC CCGTGCGCTG GTGTTCGAGC CGCAGCTGGT GCTGATGGAC GAACCCCTCG GCGCCCTCGA CAAACAACTG CGCGAACACA TGCAGATGGA AATCAAACAC CTGCACCAGC GCCTTGGCGT AACCGTGGTC TATGTGACCC ACGACCAGGG CGAAGCCCTG ACCATGTCCG ACCGCGTCGC CGTGTTCCAC CAGGGCGAGA TCCAGCAGAT CGCCCCGCCG CGCACCCTCT ACGAAGAACC GAAAAACACC TTCGTCGCCA ACTTCATCGG CGAGAACAAC CGCCTCAACG GTCGCCTGCT CAGCCAGAAC GGCGAGCGCT GCGTGGTCGA GCTGGGGCGC GGGGAAAAGG TCGAGGCGCT GGCGGTCAAC ATCGGCCAGA CCGGCGAACC GGTCACCCTG TCTATCCGCC CCGAGCGCGT CAGCCTCAAC GGTTCGAGCG ACCAATGCGT CAACCGCTTC TCCGGGCGGG TGGCCGAATT CATCTATCTG GGCGACCACG TCCGGGTGCG CCTGGAAGTC TGCGGCAAGA CCGACTTCTT CGTGAAACAA CCGATTGCCG AGCTCGATCC TGCGCTCGCA GTCGGTGACG TGGTTCCGCT TGGCTGGCAG GTCGAGCACG TTCGCGCGCT CGATCCTCTT CTAGAGGCGC ACTGA
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Protein sequence | MSQVESNAGA SDVLVSFRGV QKSYDGENLI VKDLNLDIRK GEFLTLLGPS GSGKTTSLMM LAGFETPTAG EILLAGRAIN NVPPHKRDIG MVFQNYALFP HMTVAENLAF PLTVRGLNKS DVSDKVKKVL SMVQLDAFAS RYPAQLSGGQ QQRVALARAL VFEPQLVLMD EPLGALDKQL REHMQMEIKH LHQRLGVTVV YVTHDQGEAL TMSDRVAVFH QGEIQQIAPP RTLYEEPKNT FVANFIGENN RLNGRLLSQN GERCVVELGR GEKVEALAVN IGQTGEPVTL SIRPERVSLN GSSDQCVNRF SGRVAEFIYL GDHVRVRLEV CGKTDFFVKQ PIAELDPALA VGDVVPLGWQ VEHVRALDPL LEAH
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