Gene Pfl01_5124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5124 
Symbol 
ID3717042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5756913 
End bp5757956 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content60% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_350852 
Protein GI77461345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0612646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.703361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGAT CCCTGAAGTT CACAGCCCTG ACCCTGGGCC TGATGGGTGC GGCAAGCGCA 
ATGGCCGCTG GGCCGGATCT GACCGTGGTG TCGTTTGGCG GGGCGAACAA GGCGGCGCAA
GTCAAAGCCT TCTACGCACC GTGGGAAGCA GCGGGCAACG GCAAGATCGT CGCCGGCGAG
TACAACGGTG AGATGGCCAA GGTCAAAGCC ATGGTCGACA CCAAGAGCGT GTCCTGGGAT
CTGGTCGAGG TTGAATCGCC GGAGCTGTCC CGTGGCTGCG ACGAAGACAT GTTCGAACAA
CTGGATCCTG CGCTGTTCGG CAAATCCGAA GATTACGTCA AAGGCGCGAT CCAGCCGTGC
GGCGTGGGCT TCTTCGTGTG GTCGACCGTG CTGGCCTACA ACGCCGACAA GCTGAAAACC
GCACCGACCA GCTGGGCGGA TTTCTGGGAC ACCAAGAAAT TCCCGGGCAA GCGCGGCCTG
CGCAAAGGCG CCAAGTACAC CCTCGAATTC GCACTGATGG CCGACGGCGT TGCGCCGAAA
GACGTGTACA AGGAACTGGC CAGCAAGGGC GGTCAGGATC GCGCATTCAA GAAACTGGAT
GAGCTGAAAC CGAACATCCA GTGGTGGGAA GCCGGCGCTC AGCCGCCGCA ATACCTCGCT
TCCGGTGACG TGGTCATGAG CTCGGCCTAC AACGGTCGTA TCGCTGCGGT GCAGAAAGAG
TCCAACCTGA AAGTGGTGTG GAACGGCGGC ATCTACGACT TCGACGCCTG GGCCATCCCG
AAAGGCCTGG ACGCCAAGCG CGCCGAAGCG GCGAAGAAAT TCATCGCGTT CTCGGTGCAG
CCACAACAAC AGAAGACCTA CTCGGAGAAC ATCGCCTACG GCCCGGCCAA CTCTCAGGCA
GTGCCATTGC TGGACAAGGC GATCCTGAAA GACATGCCGA CCACCCCGGA AAACATCGCC
AACCAGGTGC AGATCGATGT CAGCTTCTGG GCTGACAACG GCGAGCAACT GGAGCAGCGC
TTCAATTCCT GGGCTGCGAA GTAA
 
Protein sequence
MLRSLKFTAL TLGLMGAASA MAAGPDLTVV SFGGANKAAQ VKAFYAPWEA AGNGKIVAGE 
YNGEMAKVKA MVDTKSVSWD LVEVESPELS RGCDEDMFEQ LDPALFGKSE DYVKGAIQPC
GVGFFVWSTV LAYNADKLKT APTSWADFWD TKKFPGKRGL RKGAKYTLEF ALMADGVAPK
DVYKELASKG GQDRAFKKLD ELKPNIQWWE AGAQPPQYLA SGDVVMSSAY NGRIAAVQKE
SNLKVVWNGG IYDFDAWAIP KGLDAKRAEA AKKFIAFSVQ PQQQKTYSEN IAYGPANSQA
VPLLDKAILK DMPTTPENIA NQVQIDVSFW ADNGEQLEQR FNSWAAK