Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5120 |
Symbol | |
ID | 3717038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5752716 |
End bp | 5753390 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_350848 |
Protein GI | 77461341 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.802026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCT TCGTTATTGC TCCGTCGATT CTTTCCGCCG ACTTCGCCCG CCTGGGCGAG GAAGTGGACA ACGTGCTGGC CGCCGGTGCC GACTTCGTCC ACTTCGATGT CATGGACAAC CACTACGTAC CGAACCTGAC CATCGGCCCG ATGGTCTGCG CCGCGCTGCG CAAGTACGGC GTGACCGCGC CGATCGACGC GCACCTGATG GTCAGCCCGG TGGATCGCAT CGTCGGCGAC TTCATCGAGG CCGGCGCCAC CTACATCACC TTCCACCCGG AAGCCACGCT GCACGTCGAT CGTTCGCTGC AACTGATCCG TGAAGGCGGC TGCAAATCCG GCCTGGTGTT CAACCCGGCG ACCCCGCTGG ACGTGCTCAA GTACGTGATC GACAAGGTCG ACATGGTCTT GCTGATGAGC GTCAACCCGG GCTTCGGCGG GCAGAAATTC ATCCCCGGCA CCCTCGACAA GCTGCGTGAA GCGCGGGCGA TCATCGATGC CTCGGGCCGT GACATCCGCC TGGAAATCGA CGGCGGCGTC AACGTCAACA ACATCCGCGA AATCGCCGCT GCCGGTGCCG ACACCTTTGT CGCCGGTTCG GCGATCTTCA ATGCGCCGAA CTATCAGGAA GTCATCGACA AGATGCGTTC CGAACTGGCG CTGGCTCGCC CATGA
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Protein sequence | MQPFVIAPSI LSADFARLGE EVDNVLAAGA DFVHFDVMDN HYVPNLTIGP MVCAALRKYG VTAPIDAHLM VSPVDRIVGD FIEAGATYIT FHPEATLHVD RSLQLIREGG CKSGLVFNPA TPLDVLKYVI DKVDMVLLMS VNPGFGGQKF IPGTLDKLRE ARAIIDASGR DIRLEIDGGV NVNNIREIAA AGADTFVAGS AIFNAPNYQE VIDKMRSELA LARP
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