Gene Pfl01_5120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5120 
Symbol 
ID3717038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5752716 
End bp5753390 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content63% 
IMG OID 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_350848 
Protein GI77461341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.802026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCT TCGTTATTGC TCCGTCGATT CTTTCCGCCG ACTTCGCCCG CCTGGGCGAG 
GAAGTGGACA ACGTGCTGGC CGCCGGTGCC GACTTCGTCC ACTTCGATGT CATGGACAAC
CACTACGTAC CGAACCTGAC CATCGGCCCG ATGGTCTGCG CCGCGCTGCG CAAGTACGGC
GTGACCGCGC CGATCGACGC GCACCTGATG GTCAGCCCGG TGGATCGCAT CGTCGGCGAC
TTCATCGAGG CCGGCGCCAC CTACATCACC TTCCACCCGG AAGCCACGCT GCACGTCGAT
CGTTCGCTGC AACTGATCCG TGAAGGCGGC TGCAAATCCG GCCTGGTGTT CAACCCGGCG
ACCCCGCTGG ACGTGCTCAA GTACGTGATC GACAAGGTCG ACATGGTCTT GCTGATGAGC
GTCAACCCGG GCTTCGGCGG GCAGAAATTC ATCCCCGGCA CCCTCGACAA GCTGCGTGAA
GCGCGGGCGA TCATCGATGC CTCGGGCCGT GACATCCGCC TGGAAATCGA CGGCGGCGTC
AACGTCAACA ACATCCGCGA AATCGCCGCT GCCGGTGCCG ACACCTTTGT CGCCGGTTCG
GCGATCTTCA ATGCGCCGAA CTATCAGGAA GTCATCGACA AGATGCGTTC CGAACTGGCG
CTGGCTCGCC CATGA
 
Protein sequence
MQPFVIAPSI LSADFARLGE EVDNVLAAGA DFVHFDVMDN HYVPNLTIGP MVCAALRKYG 
VTAPIDAHLM VSPVDRIVGD FIEAGATYIT FHPEATLHVD RSLQLIREGG CKSGLVFNPA
TPLDVLKYVI DKVDMVLLMS VNPGFGGQKF IPGTLDKLRE ARAIIDASGR DIRLEIDGGV
NVNNIREIAA AGADTFVAGS AIFNAPNYQE VIDKMRSELA LARP