| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5117 |
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| Symbol | |
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| ID | 3717035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5748373 |
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| End bp | 5750283 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_350845 |
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| Protein GI | 77461338 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAC AGACGTTGTT TGTACCGCTC GCCGGATGCC TGCTCGCGAT GGCCTGCGCC
CAGGCGAACG CCGCACCCAA TCCTTATTCG AATTTCGTGG TCTTCGGCGA CAGCCTGAGC
GATGCGGGGA CTTTCACCGA CAGCGGCGGC CCGGCCGGCG CCACACAGCG CTACACCAAC
CGCACCGGTC CGGTGTATTT GGACGGCAGC GGTGAACTCC GCTCGCTGAA CTCGACGCAA
CTGCTCGGTG GCCGACTCGG CTTCACACCG GATCAAACCG CCTCCTCGTC CTCAGCAGTA
CGTGCCGGCC AAGGCCAGCC GGATGGTAAC AACTGGGCTG TCGGCGGCTA CCGCACCGAC
CAGATTCTCG ACTCGATCAC CAGCCAGTCC GCCACCGGCG AACGCACCCG CGCCGGTTAT
CTGCCGTCGA ACGGTTTCCG TGCTGACCCG AATGCCTTGT ATTACCTGAC CGGGGGCGGC
AACGACTTCC TTCAGGGCCG CGTCACCAGC CTGCCTCAGG CGAATGCCGC CGCCGATCGA
CTGGTCGACA GCGTACGCAC ACTGCAAGGT GCCGGCGCCC GCTACATCAT GGTCTGGCTG
TTGCCGGACA TCGGCCTGAC CCCGGCCATC AACGGCTCGC CGCTGCAGGC CTTCACCTCG
CAACTCAGCA CCCAGTTCAA CACCGAACTG GTCAGCCAGT TGCAGAGCGT CAACGCCAAC
GTGATTCCGC TGAACGTCCC GGTTCTGCTC AAAGAGGCGT TCGCCAATCC GGCGCAATTC
GGTCTGGCGA CCGACCAGAA TCTGGTCGGC ACCTGCTTCA GCGGCAGCGG CTGCACCGAG
AACGCCCGGT ATGGCATCAA CAGCGCCACC CCGGATCCGA CCAAGCTGAT CTACAACGAC
GCCGTCCACC CGACCGAAGC CGGGCAGCGC CTGATTGCCG ATTACGCTTA CTCGCTGCTG
GCCGCGCCAT GGGAAGCGAC TCTGCTTCCG CAAATGGCCC AGGGCACCTT GCGCTCGCAT
CAGGATGAAC TGCGCAACCA GTGGCTGGCG GATTGGGAAA ACTGGCAGGC CGTTGGCCAA
TGGCGGGCGA TTGTTGCCGG TGGTGGCCAG CATCAGGACT TCGACAGCCA GCGCAGCGGC
GCCAGCGCCG ACGGTAACGG TTACAACCTG AACATCGGCG GCAGCTACCG TCTCAACGAC
GCCTGGCGCG TGGGCGTGGC GGCCGGTTTC TACAATCAGA AGCTCGAGGC CGGCGACAAC
GACTCGGACT ACAAACTGAA CACTTATCTG GGCACCGCGT TCGCCCAGTA CCAGCAGAAC
CGCTGGTGGG GTGACGCCGC CGTGACCGCC GGACATCTGG ATTACGACAG CCTCAAACGC
AAATTCCAGC TGGGGGTAAA CGAACGCGGC GAGAAAGGCG ATACCGACGG CTATGTTCTG
GCCTTCAGTG GACGCGTGGG TTACGACATT GCGCCAGAGG CAAGCAGCCC ATGGCACCTG
TCGCCGTTCG TCAGCGCCGA TTTCGCCAAG GTTGAAGTCG ATGGTTACTC GGAAAACGGC
GCCGACTCCA CCGCGCTGAC GTTCGATGAC CAGTCGCGCA TCTCCCGGCG CCTGGGCCTC
GGGATCCAGG GCAAGTACCA GATCACCTCG CAGACCCAGG TGTTCGGCGA ACTGGCCCAC
GAACGTGAGT ACAACGACGA CACCCAGAAT GTGACGATGA ACCTCAACAG CCTGCCGAAC
AACCGCTACA CCCTGGCCGG CTATACCCCT CAGACCAACC TGAACCGCCT GAACCTGGGC
GTGAGCCACA ACCTCACCAA GGATCTGGCA TTACGTGCCA GCTACGACAT CCGCAAGGAT
GACGACTTCA CCCAGCAAGG GATCAACGTC GGCGTAGCGC TCGACTTCTG A
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| Protein sequence | MIKQTLFVPL AGCLLAMACA QANAAPNPYS NFVVFGDSLS DAGTFTDSGG PAGATQRYTN
RTGPVYLDGS GELRSLNSTQ LLGGRLGFTP DQTASSSSAV RAGQGQPDGN NWAVGGYRTD
QILDSITSQS ATGERTRAGY LPSNGFRADP NALYYLTGGG NDFLQGRVTS LPQANAAADR
LVDSVRTLQG AGARYIMVWL LPDIGLTPAI NGSPLQAFTS QLSTQFNTEL VSQLQSVNAN
VIPLNVPVLL KEAFANPAQF GLATDQNLVG TCFSGSGCTE NARYGINSAT PDPTKLIYND
AVHPTEAGQR LIADYAYSLL AAPWEATLLP QMAQGTLRSH QDELRNQWLA DWENWQAVGQ
WRAIVAGGGQ HQDFDSQRSG ASADGNGYNL NIGGSYRLND AWRVGVAAGF YNQKLEAGDN
DSDYKLNTYL GTAFAQYQQN RWWGDAAVTA GHLDYDSLKR KFQLGVNERG EKGDTDGYVL
AFSGRVGYDI APEASSPWHL SPFVSADFAK VEVDGYSENG ADSTALTFDD QSRISRRLGL
GIQGKYQITS QTQVFGELAH EREYNDDTQN VTMNLNSLPN NRYTLAGYTP QTNLNRLNLG
VSHNLTKDLA LRASYDIRKD DDFTQQGINV GVALDF
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