Gene Pfl01_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5105 
Symbol 
ID3716445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5739305 
End bp5740255 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350833 
Protein GI77461326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.697261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CCCGTTACAA GATCGTTTTC GACGGCGCGC TCCAGCCCGG CGTCGATATC 
ACCACGGCCA AGCTTAACCT GGCCGACCTG TTCAAAAGCG ATGTCGCCGC CATCGAACGC
CTGTTCAGTG GCCGCACCGT CGCGCTCAAG CGTGACCTGT CGCACAGCGA TGCGCAGACC
TATCTGCAAG CGCTGGGCAA GACCGGGATC GATGCCCGGA TCGAAGCGGA AACGCCCATC
GAGCTGAATC TGTCGGATGT CCACGAGCAA AGCGCTGCCG TCGCGGAGCC TGACTCGCCT
TATGCTCCCC CTCGCGCCGC CGTCGGTGAA AGCCTGCCGG CATTCGCGCC TCTCAAGCCG
CTCAGCGTCG AAGGCCGGAT CGGCCGCTTG CGTTACCTGG CATGGTCGAT GGTGTTAAGC
CTGGCCGCCC TGCCGATCGT CAGCGTGTTC GCATTGATCG GCCTGGGCCT GGTGAGCGCC
GACTCGACCA CTGGCCTGAT CATCGGCGGT CTCCTCGCCT TCTTCCTGTT TCTGGCCTTC
GCGATTGTCG GGATCCTGTT CAGCATCCAG CGCTTGCACG ATATCGGCTG GTCGGGATGG
CTCTGGCTGC TGACGCTGGT GCCGTTCGTG GGCAGTTTCT TCCCGCTGGT GATCATGGTC
GTGCCGGGCA ATACCGGCGC CAATCGCTAT GGCCCACCAC CTCCGCCGAA CAGCACGGCA
GTCAAAGTGC TGTGCTCGCT GTGGATCGTG TTTATCGGGC TGTTTTTCGT GGGTGGCATG
CTGGGCGGGA TTACTGCCAT CCAGCAGGAA TATGAAAGCA GCCTTGAAAG CAGCTACGAG
AGCGGTTCGG TGACCACCGA TGAAATCGAT GTCGAAGTCG AACCCGCCGC GAATTCGGCA
GACGATGCAG CCGAAGCTGC TCTCACCCCT GTAGACTCTG CGAAAGAATG A
 
Protein sequence
MSEPRYKIVF DGALQPGVDI TTAKLNLADL FKSDVAAIER LFSGRTVALK RDLSHSDAQT 
YLQALGKTGI DARIEAETPI ELNLSDVHEQ SAAVAEPDSP YAPPRAAVGE SLPAFAPLKP
LSVEGRIGRL RYLAWSMVLS LAALPIVSVF ALIGLGLVSA DSTTGLIIGG LLAFFLFLAF
AIVGILFSIQ RLHDIGWSGW LWLLTLVPFV GSFFPLVIMV VPGNTGANRY GPPPPPNSTA
VKVLCSLWIV FIGLFFVGGM LGGITAIQQE YESSLESSYE SGSVTTDEID VEVEPAANSA
DDAAEAALTP VDSAKE