Gene Pfl01_5104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5104 
Symbol 
ID3716444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5738266 
End bp5739234 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_350832 
Protein GI77461325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC CCGCTCTGCT CGAACAACGT CTGCGCCTGC CCGTAGTGGC AGCACCGATG 
TTTCTGATCT CCAATCCTGA ACTGGTGCTG GCGTGCTGCC GTAACGGCGT GGTCGGCAGC
TTCCCGGCGC TGAACCAACG CGAAAGCAGC GGATTCAAGG CATGGCTGGA GCAGATCGAA
GCGGGACTGG CGACACTGGA GAACCCGGCG CCTTATGCCG TGAACCTGAT TGTTCACAAG
AGCAATCCAC GTCTGGAGGC GGACCTGAAC ATCTGCGTCG AACACAAAGT CCCCATCGTC
ATCACCAGTC TTGGTGCCGT GAAGGAAGTG GTAGACGCCG TGCACAGCTA CGGCGGCCTG
GTCTTCCACG ACGTGACGAC CCGCCGCCAT GCCGAGAAAG CCGCCGAGGC CGGTGTCGAT
GGCTTGATCG CCGTCGCGGC CGGTGCCGGT GGGCACGCCG GGACCTGGAG CCCGTTCTCG
CTGATCGCCG AGATCCGCGA GTGCTTCGAC AAAACCCTGT TGCTTGCAGG ATGTTTGAAC
CATGGGCATG AGATTCTCGC CGCACAACTG CTCGGCGCGG ATCTGGCCTA CTTCGGCACG
CGATTTATCG GCACCACTGA AAGTCATGCG CCTGACGCCT ACAAGCAGAT GCTGCTGACT
GCCAAAGCCG CCGACATCAT TCATACTCCT GCCGTGTCCG GTGTTCCGGC CAGTTTTATG
CGTCAAAGCC TGGAGGCCGC CGGTTTCGAC ATGGCAGCCC TGCAGGGCAA GGGTGAAGTG
AACTTCGGCG ACAAGCTCAA GCCGATCAAC GACGAAGCCA AGGCCTGGAA AACCGTGTGG
TCGGCAGGTC AGGGCGTCGG GCAGATCGAC GATCTGCCAA GCGTGGATCA ACTGGTGGCG
CGTCTCGATG CCGAATACCG CCAGGCCCTG GAGCACGCAG CGCAACTGCC GAAACGCTGG
CCACGTTGA
 
Protein sequence
MSLPALLEQR LRLPVVAAPM FLISNPELVL ACCRNGVVGS FPALNQRESS GFKAWLEQIE 
AGLATLENPA PYAVNLIVHK SNPRLEADLN ICVEHKVPIV ITSLGAVKEV VDAVHSYGGL
VFHDVTTRRH AEKAAEAGVD GLIAVAAGAG GHAGTWSPFS LIAEIRECFD KTLLLAGCLN
HGHEILAAQL LGADLAYFGT RFIGTTESHA PDAYKQMLLT AKAADIIHTP AVSGVPASFM
RQSLEAAGFD MAALQGKGEV NFGDKLKPIN DEAKAWKTVW SAGQGVGQID DLPSVDQLVA
RLDAEYRQAL EHAAQLPKRW PR