Gene Pfl01_5083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5083 
Symbol 
ID3715945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5709162 
End bp5709635 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content57% 
IMG OID 
Product30S ribosomal protein S7 
Protein accessionYP_350811 
Protein GI77461304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000594669 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.504343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAC GTCGCGTAGC AGCAAAGCGT GAGATTCTGG ACGATCCGAA ATACGGAAGC 
CAAATCCTCG CCAAATTCAT GAACCACGTT ATGGAAAGCG GCAAGAAAGC CGTTGCCGAG
CGTATCGTTT ATGGTGCCCT GGAAACCGTT GCGGCTCGCA AGACCGGCAC CGATCCCCTG
GAACTCTTCG AAAAAGCACT CGACGCCATC GCTCCGCTGG TCGAAGTGAA GTCGCGCCGC
GTTGGTGGTG CTACTTACCA GGTTCCGGTC GAGGTTCGTC CGTCCCGTCG TAACGCTCTG
GCAATGCGCT GGTTGGTAGA CTTCGCCCGC AAGCGCGGCG AGAAGTCCAT GGCTCTGCGC
TTGGCTGGCG AACTGCTGGA TGCTGCTGAA GGTAAAGGTG CTGCTGTTAA GAAGCGTGAA
GACGTGCACC GTATGGCCGA AGCTAACAAA GCTTTCTCGC ACTACCGCTT CTAA
 
Protein sequence
MPRRRVAAKR EILDDPKYGS QILAKFMNHV MESGKKAVAE RIVYGALETV AARKTGTDPL 
ELFEKALDAI APLVEVKSRR VGGATYQVPV EVRPSRRNAL AMRWLVDFAR KRGEKSMALR
LAGELLDAAE GKGAAVKKRE DVHRMAEANK AFSHYRF