Gene Pfl01_5082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5082 
Symbol 
ID3715944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5707026 
End bp5709131 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content55% 
IMG OID 
Productelongation factor G 
Protein accessionYP_350810 
Protein GI77461303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000061463 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.350289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTA CTACTCCGAT TAGTCGCTAC CGTAACATCG GTATCGTCGC TCACGTGGAT 
GCTGGTAAAA CCACCACCAC CGAGCGCGTC CTTTTTTACA CTGGCAAAAG TCACAAAATG
GGCGAGGTGC ATGACGGCGC CGCGACCACG GACTGGATGG TTCAGGAGCA GGAGCGTGGT
ATTACCATTA CTTCTGCTGC CATTACCGCC TTCTGGAAAG GTTCCGAGAA GCAGTACCCA
CACGAACATC GCTTCAACGT AATCGATACC CCGGGCCACG TAGACTTCAC CATTGAAGTA
GAGCGTTCCC TGCGCGTACT CGACGGCGCG GTCGTTGTGT TCTGCGGTAC TTCGGGTGTT
GAGCCTCAGT CGGAAACCGT ATGGCGTCAG GCCAACAAAT ACGGCGTTCC ACGTCTTGTT
TACGTAAACA AGATGGACCG TGCTGGTGCC AACTTCCTGC GCGTGATCGG TCAGATCAAA
CAGCGTCTGG GTCACACTCC GGTGCCGATC CAGCTGGCTA TCGGTTCGGA AGATAACTTC
CAGGGCCAGA TCGACCTGAT CAACATGCAA GCTGTCTACT GGAACGACTC TGACAAGGGT
ATGGTTCCGG TTCGCAAGGA GATCCCTGCG GACATGCTTG AACTGGCTGA AGAATGGCGC
AACAACATGG TTGAAGCCGC CGCCGAAGCC AGCGAAGAGC TGATGAACAA GTACCTGGAA
GGTGAAGAGC TGTCGATCGC CGAGATCAAG GCTGCTCTGC GTCAACGTAC TATCGCCGGC
GAAATCGTTC TGGCTGTTTG CGGTTCTTCG TTCAAGAACA AGGGCGTTCC CCTGGTTCTC
GACGCCGTTA TCGACTTCCT GCCTGCTCCG ACCGACATTC CTGCTATCAA GGGTTCCAAC
CCTGATAACG AGGAAGAAGA GATGGAGCGT CATGCAAGCG ACGACGAGCC GTTCGCGGCC
CTGGCGTTCA AGATCGCTAC CGACCCATTC GTGGGTACCT TGACCTTCGT CCGTGTTTAC
TCGGGCGTGT TGAACTCCGG CGACGGCGTG ATCAACTCGG TTAAGGGCAA GAAAGAGCGC
GTTGGTCGTA TGGTGCAAAT GCACGCAAAC GCCCGTGAAG AGATCAAGGA AGTGCGCGCT
GGCGACATCG CGGCCCTGAT CGGCATGAAG GACGTCACCA CTGGTGAAAC CCTCTGCAAC
GCTGACAAGC CAATCATCCT GGTTCGCATG GACTTCCCGG AGCCGGTTAT TTCGGTTGCC
GTAGAGCCTA AGACCAAGGA TGACCAGGAA AAAATGGGTA TCGCTCTGGG CAAACTTGCT
CAGGAAGACC CGTCTTTCCG CGTTAAGACT GATGAAGAGA CTGGTCAGAC GATCATCTCC
GGCATGGGCG AGTTGCACCT GGACATCCTG GTTGACCGGA TGCGCCGTGA GTTCAACGTC
GAAGCCAACA TCGGCAAGCC ACAGGTTTCG TACCGTGAGC GCATCACGAA GAACTGCGAA
ATCGAAGGCA AGTTCGTTCG TCAGTCCGGC GGTCGTGGTC AGTTCGGTCA CTGCTGGATT
CGCTTTGCTC CTGCTGACGA AGGTCAGGAA GGTCTGCAAT TCCTGAACGA AGTAGTGGGT
GGTGTGGTTC CTAAGGAATA CATCCCGGCT ATCCAGAAGG GTATCGAAGA GCAGATGAAG
AACGGCGTTG TTGCCGGCTA TCCGCTGATC GGCCTGAAGG CTACCGTGTT CGATGGTTCT
TACCACGACG TCGACTCCAA CGAGATGGCG TTTAAAGTGG CTGCTTCCAT GGCGACCAAG
CAACTGGCCC AGAAGGGCGG TGGTGAGTTG CTCGAGCCGA TCATGGCGGT AGAGGTTGTT
ACGCCTGAAG ACTATATGGG TGATGTGATG GGCGACCTTA ACCGTCGTCG CGGCATGATC
CAGGGTATGG AAGACACAGT GTCCGGCAAG GTTATCCGTG CCGAAGTTCC ACTGGGTGAG
ATGTTCGGTT ATGCGACCGA CGTTCGCTCC ATGTCCCAGG GTCGCGCAAG CTACTCTATG
GAATTCAAAA AATACGATAC GGCTCCGTCG CACATCGTCG AATCCGTTAC CAAAAAACAA
GGCTGA
 
Protein sequence
MARTTPISRY RNIGIVAHVD AGKTTTTERV LFYTGKSHKM GEVHDGAATT DWMVQEQERG 
ITITSAAITA FWKGSEKQYP HEHRFNVIDT PGHVDFTIEV ERSLRVLDGA VVVFCGTSGV
EPQSETVWRQ ANKYGVPRLV YVNKMDRAGA NFLRVIGQIK QRLGHTPVPI QLAIGSEDNF
QGQIDLINMQ AVYWNDSDKG MVPVRKEIPA DMLELAEEWR NNMVEAAAEA SEELMNKYLE
GEELSIAEIK AALRQRTIAG EIVLAVCGSS FKNKGVPLVL DAVIDFLPAP TDIPAIKGSN
PDNEEEEMER HASDDEPFAA LAFKIATDPF VGTLTFVRVY SGVLNSGDGV INSVKGKKER
VGRMVQMHAN AREEIKEVRA GDIAALIGMK DVTTGETLCN ADKPIILVRM DFPEPVISVA
VEPKTKDDQE KMGIALGKLA QEDPSFRVKT DEETGQTIIS GMGELHLDIL VDRMRREFNV
EANIGKPQVS YRERITKNCE IEGKFVRQSG GRGQFGHCWI RFAPADEGQE GLQFLNEVVG
GVVPKEYIPA IQKGIEEQMK NGVVAGYPLI GLKATVFDGS YHDVDSNEMA FKVAASMATK
QLAQKGGGEL LEPIMAVEVV TPEDYMGDVM GDLNRRRGMI QGMEDTVSGK VIRAEVPLGE
MFGYATDVRS MSQGRASYSM EFKKYDTAPS HIVESVTKKQ G