| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5078 |
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| Symbol | rplD |
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| ID | 3715940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5704001 |
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| End bp | 5704603 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_350806 |
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| Protein GI | 77461299 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000647229 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.290105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTAA ATGTAAATGA CGCTCAAGCG ATCGAAGTTT CCGAACTGAC ATTTGGCGGC
GAATTCAACG AGACGCTGGT TCACCAAGCA GTCGTGGCCT ACATGGCCGG CGGCCGTCAA
GGTAGCAAGC AGCAAAAGAC CCGTTCCGAC GTTCGTGGTG GCGGTAAGCG CCCATGGCGT
CAGAAAGGTA CTGGCCGTGC TCGTGCCGGT ACTATCCGTA GCCCAATCTG GCGCGGCGGC
GGCACCACTT TCGCAGCTCG TCCACAGGAT CACTCCCAGA AGCTGAACAA GAAGATGTAC
CGCGCAGCAA TGCGTTCCAT CCTTGCTGAG CTGGTGCGTA CTGATCGTCT GGTCGTGGTT
CAGGATTTCG CAGTTGAAAC TCCGAAAACC AAAGACCTGC TGGGCAAACT GAACAACATG
AGCCTGACCG ACGTTCTGAT CGTGTCGGAC GCTGTTGATC AGAACCTGTA CCTGGCTGCT
CGCAACCTGC CGCACGTAGA TGTACGTGAC GTGCAAGGTT CCGATCCAGT TAGTCTGATC
GCATACGACA AGGTGTTGAT CACCGTGTCG GCCGTGAAGA AATTCGAGGA GCTGCTGGGA
TGA
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| Protein sequence | MQLNVNDAQA IEVSELTFGG EFNETLVHQA VVAYMAGGRQ GSKQQKTRSD VRGGGKRPWR
QKGTGRARAG TIRSPIWRGG GTTFAARPQD HSQKLNKKMY RAAMRSILAE LVRTDRLVVV
QDFAVETPKT KDLLGKLNNM SLTDVLIVSD AVDQNLYLAA RNLPHVDVRD VQGSDPVSLI
AYDKVLITVS AVKKFEELLG
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