| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5056 |
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| Symbol | rpsD |
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| ID | 3714159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5693395 |
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| End bp | 5694015 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_350784 |
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| Protein GI | 77461277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00247728 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.244863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ACATTGGTCC AAAATGCAAA CTCGCTCGTC GCGAAGGCAC CGATCTCTTC
CTGAAGAGCG GCGTGCGCGC GATCGAATCG AAGTGCAACA TTGAAGCAGC ACCTGGTATC
CACGGCCAAC GCCGCGGTCG CCAGTCCGAT TACGGCACCC AACTGCGCGA AAAGCAGAAG
GTCCGTCGTA TCTACGGCGT TCTCGAGCGT CAGTTCAGCG GCTACTACAA GGCTGCTGCC
AGCAAGAAAG GTGCAACCGG TGAAAACCTG CTGCAACTGC TCGAATGCCG TCTGGACAAC
GTTGTATACC GTATGGGCTT CGGTTCGACT CGTGCCGAAT CCCGTCAGCT GGTATCGCAC
AAGTCGATCA GCGTTAACGG TCAGACCGTA AACGTTCCGT CCTACCAGGT TCGTGCTGGT
GACGTGGTTG CTGTTCGCGA GAAGGCAAAG AACCAACTTC GCATTGTCCA AGCTCTCGAG
CTGTGCGCCC AACGTGGTCG CGTAGAATGG GTAGAGGTAG ATGCTGAGAA GAAGTCGGGC
GTTTTCAAGA ACGTTCCTGC TCGCAGTGAT CTGTCCGCCG ACATCAACGA AAGCCTGATT
GTCGAGCTCT ACTCCAAGTA A
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| Protein sequence | MARYIGPKCK LARREGTDLF LKSGVRAIES KCNIEAAPGI HGQRRGRQSD YGTQLREKQK
VRRIYGVLER QFSGYYKAAA SKKGATGENL LQLLECRLDN VVYRMGFGST RAESRQLVSH
KSISVNGQTV NVPSYQVRAG DVVAVREKAK NQLRIVQALE LCAQRGRVEW VEVDAEKKSG
VFKNVPARSD LSADINESLI VELYSK
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