| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5055 |
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| Symbol | |
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| ID | 3714158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5692367 |
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| End bp | 5693368 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_350783 |
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| Protein GI | 77461276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0160256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.141854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTT CGGTAAATGA GTTCCTGACA CCCCGCCACA TTGATGTGCA GGTTGTCAGT
CCAACCCGCG CCAAGATCAC TCTCGAGCCT CTCGAGCGTG GTTTTGGCCA CACCCTGGGC
AACGCGCTGC GCCGCATCCT GTTGTCCTCA ATGCCCGGCT GCGCAGTAGT CGAGGCCGAG
ATTGACGGTG TGCTCCACGA GTACAGCGCC ATCGAAGGTG TACAGGAAGA CGTAATTGAA
ATCCTGTTGA ACCTTAAAGG TCTGGCCATC AAGCTGCACG GTCGTGACGA AGTTACGCTG
ACCTTGTCGA AGAAGGGTTC GGGGGTGGTT ACCGCTGCCG ATATTCAGCT GGATCATGAT
GTCGAGATCG TTAATCCCGA TCACGTAATC GCTAACCTGG CGTCTAACGG CGCCCTGAAC
ATGAAGCTCA CCGTAGCTCG TGGTCGTGGT TATGAACCAG CCGACTCGCG TCAGAGCGAT
GAAGACGAAA GCCGCAGCAT CGGTCGCTTG CAGCTCGACT CTTCGTTCAG CCCGGTTCGC
CGTATCGCAT ATGTGGTGGA AAACGCCCGT GTCGAGCAGC GTACCAACCT GGACAAGCTG
GTTATTGATC TGGAAACCAA TGGTACTCTG GATCCTGAAG AGGCTATCCG CCGTGCTGCA
ACCATTCTGC AACAGCAGTT GGCTGCGTTC GTCGACCTCA AAGGTGACAG TGAGCCAGTG
GTTGTCGAGC AGGAAGACGA GATCGATCCG ATCCTGCTTC GCCCGGTTGA CGATCTGGAA
CTGACTGTAC GTTCGGCTAA CTGCCTTAAG GCGGAAAACA TCTACTACAT CGGCGACCTG
ATTCAGCGTA CCGAAGTAGA GCTGTTGAAG ACTCCGAACC TGGGCAAGAA ATCCTTGACT
GAAATCAAGG ACGTTCTGGC CTCCCGCGGT CTGTCCCTCG GCATGCGCCT CGACAACTGG
CCGCCTGCAA GTCTTAAGAA GGACGACAAG GCGACTGCCT GA
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| Protein sequence | MQISVNEFLT PRHIDVQVVS PTRAKITLEP LERGFGHTLG NALRRILLSS MPGCAVVEAE
IDGVLHEYSA IEGVQEDVIE ILLNLKGLAI KLHGRDEVTL TLSKKGSGVV TAADIQLDHD
VEIVNPDHVI ANLASNGALN MKLTVARGRG YEPADSRQSD EDESRSIGRL QLDSSFSPVR
RIAYVVENAR VEQRTNLDKL VIDLETNGTL DPEEAIRRAA TILQQQLAAF VDLKGDSEPV
VVEQEDEIDP ILLRPVDDLE LTVRSANCLK AENIYYIGDL IQRTEVELLK TPNLGKKSLT
EIKDVLASRG LSLGMRLDNW PPASLKKDDK ATA
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