Gene Pfl01_5051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5051 
SymboluvrA 
ID3713707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5686728 
End bp5689562 
Gene Length2835 bp 
Protein Length944 aa 
Translation table11 
GC content62% 
IMG OID 
Productexcinuclease ABC subunit A 
Protein accessionYP_350779 
Protein GI77461272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0371407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAAGA TCCTGATTCG TGGGGCCCGC ACCCACAACC TGAAGAACAT CGACCTGACC 
CTGCCACGGG ACAAACTGAT CGTCATCACC GGCCTGTCCG GATCCGGCAA GTCGTCCCTG
GCCTTCGACA CGCTGTACGC CGAAGGTCAG CGCCGCTATG TCGAATCCCT GTCGGCCTAT
GCCCGGCAGT TCCTGTCGAT GATGGAAAAA CCCGACGTCG ACACCATCGA AGGCCTGTCG
CCGGCGATCT CCATCGAACA GAAGTCGACC TCGCACAACC CCCGCTCCAC GGTCGGCACC
ATCACCGAAA TCTACGACTA CCTGCGCCTG CTTTATGCCC GCGTAGGTAC GCCGCGCTGC
CCGGATCACG ACATTCCGCT GGAAGCACAG ACTGTCAGCC AGATGGTCGA CCTGGTACTG
GCCCAGCCGG AAGGCAGCAA GCTGATGCTG CTGGCGCCGG TGATCCGCGA GCGCAAGGGC
GAGCACCTGT CGGTGTTCGA AGAGCTGCGC GCCCAGGGCT TCGTCCGGGC CCGGGTCAAT
GGCCGGCTCT GCGAGCTGGA CGAACTGCCG AAACTGGATA AACAGAAGAA GCATACGATC
GAAGTGGTGG TCGACCGCTT CAAGGTTCGC GCCGACCTGC AGCAGCGTCT GGCGGAGTCC
TTCGAGACCG CGCTGAAGCT GGCCGACGGC ATCGCCCTGG TGGCGCCGAT GGACGACGAG
CCGGGCGAAG AGATGATCTT CTCCGCGCGC TTCGCCTGCC CGATCTGCGG CCACGCAATC
AGCGAGCTGG AACCCAAGCT GTTTTCCTTC AACAACCCGG CCGGCGCCTG CCCGACCTGC
GACGGTCTGG GAGTGAAGCA GTTTTTCGAC ATCAAGCGAC TGGTCAACGG TGATTTGACC
CTGGCCGAAG GCGCGATCCG TGGCTGGGAC AGGCGCAACG TCTATTACTT CCAGATGCTC
GGCTCATTGG CCGCGCATTA TGGTTTCAGC CTGGAGCAGC CGTTCAACGA GCTGCCGGCC
GATCAACAGA AATACATCCT GCACGGCAGT GGCTCGCAGA ACGTCGATTT CAAATACCTC
AACGACCGGG GCGACATCGT CAAACGCTCG CACCCGTTCG AAGGCATCGT GCCGAATCTC
GAACGCCGCT ACCGCGAAAC CGAATCGGCG AGCGTGCGTG AAGAGCTGGC GAAGTTCCTC
AGCACCCAGT CGTGCCCGGA TTGCCGCGGC ACTCGCCTGC GTCGCGAAGC GCGACACGTG
TGGGTCGGCG AAAAAACCCT GCCGGCGGTG ACCAACCTGC CGATCGGCGA CGCCTGCGAT
TACTTCGGCG CGCTGAAGAT GACCGGCCGC CGTGGCGAAA TCGCCGACAA GATTCTCAAG
GAAATTCGCG AGCGCCTGCA GTTTCTGGTC AACGTCGGTC TGGACTATCT GTCGCTGGAT
CGCAGTGCCG ATACGTTGTC TGGCGGTGAA GCGCAGCGGA TTCGTCTGGC CAGCCAGATC
GGCGCGGGCC TTGTGGGTGT TCTGTACATC CTCGACGAGC CGTCCATTGG CCTGCACCAG
CGCGACAACG ATCGCCTGCT CGGCACCCTC AAACACCTGC GCGACATAGG CAACACGGTC
ATCGTGGTAG AGCATGACGA AGACGCGATC CGCTTGGCCG ACTACGTAGT GGATATCGGC
CCGGGTGCCG GCGTTCATGG CGGGCAGATC GTCGCCGAAG GCACGCCGGA CGAAGTCATG
GCGCACCCGG ACTCGCTGAC CGGCAAATAC CTGTCGGGCC GGGTCAAGAT CGAAGTACCG
GCCAAGCGCA CGCCGCGTAA CAAGAAGCAG GTGCTGTCGC TCAAGGGGGC GCGCGGCAAC
AATCTGCGCA ACGTCGACCT GGAAATCCCG ATCGGCTTGC TGACCTGCGT GACCGGTGTC
TCCGGCTCGG GCAAATCGAC GTTGATCAAC AACACGCTGT TCCCTTTGAG CGCCACGGCA
CTCAATGGCG CGACCACCCT GGAAGCGGCA GCTCATGACA GCATCAAGGG CCTGGAGCAT
CTGGACAAGG TCGTCGACAT CGACCAGAGC CCGATCGGTC GTACGCCACG TTCCAACCCG
GCGACCTATA CCGGGCTGTT CACGCCGATT CGCGAACTGT TCGCCGGTGT GCCCGAATCC
CGATCTCGTG GTTACGGCCC GGGGCGCTTC TCGTTCAACG TCAAGGGCGG TCGTTGCGAA
GCCTGCCAGG GCGACGGTCT GATCAAGGTG GAAATGCACT TCCTGCCGGA CATCTACGTC
CCGTGTGATG TGTGCAAGAG CAAGCGCTAC AACCGCGAAA CCCTGGAGAT CAAATATAAG
GGCAAGAACA TCCACGAAAC TCTCGAGATG ACCATCGAGG AAGCGCGAGA GTTCTTCGAC
GCGGTGCCGG CGCTGGCGCG CAAGCTGCAA ACGCTGATGG ATGTGGGGCT TTCGTACATC
AAGCTTGGAC AATCGGCCAC GACGCTTTCC GGTGGTGAAG CGCAGCGGGT CAAGTTGTCC
CGCGAGCTGT CCAAGCGCGA TACCGGCAAG ACCCTGTACA TCCTCGACGA GCCGACCACC
GGCCTGCACT TCGCGGATAT CCAGCAACTG CTCGACGTAC TGCATCGCCT GCGCGACCAC
GGCAACACCG TGGTGGTGAT CGAGCACAAC CTCGACGTGA TCAAAACCGC CGACTGGCTG
GTGGATCTTG GCCCCGAGGG TGGTTCGAAA GGTGGTCAGA TCATCGCTAC CGGTACGCCG
GAGGAAGTGG CCGAGATGAA ACAATCTCAC ACCGGGCATT ACCTCAAGCC GCTGCTGATC
CGCGATCGGG CCTGA
 
Protein sequence
MDKILIRGAR THNLKNIDLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY 
ARQFLSMMEK PDVDTIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARVGTPRC
PDHDIPLEAQ TVSQMVDLVL AQPEGSKLML LAPVIRERKG EHLSVFEELR AQGFVRARVN
GRLCELDELP KLDKQKKHTI EVVVDRFKVR ADLQQRLAES FETALKLADG IALVAPMDDE
PGEEMIFSAR FACPICGHAI SELEPKLFSF NNPAGACPTC DGLGVKQFFD IKRLVNGDLT
LAEGAIRGWD RRNVYYFQML GSLAAHYGFS LEQPFNELPA DQQKYILHGS GSQNVDFKYL
NDRGDIVKRS HPFEGIVPNL ERRYRETESA SVREELAKFL STQSCPDCRG TRLRREARHV
WVGEKTLPAV TNLPIGDACD YFGALKMTGR RGEIADKILK EIRERLQFLV NVGLDYLSLD
RSADTLSGGE AQRIRLASQI GAGLVGVLYI LDEPSIGLHQ RDNDRLLGTL KHLRDIGNTV
IVVEHDEDAI RLADYVVDIG PGAGVHGGQI VAEGTPDEVM AHPDSLTGKY LSGRVKIEVP
AKRTPRNKKQ VLSLKGARGN NLRNVDLEIP IGLLTCVTGV SGSGKSTLIN NTLFPLSATA
LNGATTLEAA AHDSIKGLEH LDKVVDIDQS PIGRTPRSNP ATYTGLFTPI RELFAGVPES
RSRGYGPGRF SFNVKGGRCE ACQGDGLIKV EMHFLPDIYV PCDVCKSKRY NRETLEIKYK
GKNIHETLEM TIEEAREFFD AVPALARKLQ TLMDVGLSYI KLGQSATTLS GGEAQRVKLS
RELSKRDTGK TLYILDEPTT GLHFADIQQL LDVLHRLRDH GNTVVVIEHN LDVIKTADWL
VDLGPEGGSK GGQIIATGTP EEVAEMKQSH TGHYLKPLLI RDRA