Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5051 |
Symbol | uvrA |
ID | 3713707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5686728 |
End bp | 5689562 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | excinuclease ABC subunit A |
Protein accession | YP_350779 |
Protein GI | 77461272 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0371407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGACAAGA TCCTGATTCG TGGGGCCCGC ACCCACAACC TGAAGAACAT CGACCTGACC CTGCCACGGG ACAAACTGAT CGTCATCACC GGCCTGTCCG GATCCGGCAA GTCGTCCCTG GCCTTCGACA CGCTGTACGC CGAAGGTCAG CGCCGCTATG TCGAATCCCT GTCGGCCTAT GCCCGGCAGT TCCTGTCGAT GATGGAAAAA CCCGACGTCG ACACCATCGA AGGCCTGTCG CCGGCGATCT CCATCGAACA GAAGTCGACC TCGCACAACC CCCGCTCCAC GGTCGGCACC ATCACCGAAA TCTACGACTA CCTGCGCCTG CTTTATGCCC GCGTAGGTAC GCCGCGCTGC CCGGATCACG ACATTCCGCT GGAAGCACAG ACTGTCAGCC AGATGGTCGA CCTGGTACTG GCCCAGCCGG AAGGCAGCAA GCTGATGCTG CTGGCGCCGG TGATCCGCGA GCGCAAGGGC GAGCACCTGT CGGTGTTCGA AGAGCTGCGC GCCCAGGGCT TCGTCCGGGC CCGGGTCAAT GGCCGGCTCT GCGAGCTGGA CGAACTGCCG AAACTGGATA AACAGAAGAA GCATACGATC GAAGTGGTGG TCGACCGCTT CAAGGTTCGC GCCGACCTGC AGCAGCGTCT GGCGGAGTCC TTCGAGACCG CGCTGAAGCT GGCCGACGGC ATCGCCCTGG TGGCGCCGAT GGACGACGAG CCGGGCGAAG AGATGATCTT CTCCGCGCGC TTCGCCTGCC CGATCTGCGG CCACGCAATC AGCGAGCTGG AACCCAAGCT GTTTTCCTTC AACAACCCGG CCGGCGCCTG CCCGACCTGC GACGGTCTGG GAGTGAAGCA GTTTTTCGAC ATCAAGCGAC TGGTCAACGG TGATTTGACC CTGGCCGAAG GCGCGATCCG TGGCTGGGAC AGGCGCAACG TCTATTACTT CCAGATGCTC GGCTCATTGG CCGCGCATTA TGGTTTCAGC CTGGAGCAGC CGTTCAACGA GCTGCCGGCC GATCAACAGA AATACATCCT GCACGGCAGT GGCTCGCAGA ACGTCGATTT CAAATACCTC AACGACCGGG GCGACATCGT CAAACGCTCG CACCCGTTCG AAGGCATCGT GCCGAATCTC GAACGCCGCT ACCGCGAAAC CGAATCGGCG AGCGTGCGTG AAGAGCTGGC GAAGTTCCTC AGCACCCAGT CGTGCCCGGA TTGCCGCGGC ACTCGCCTGC GTCGCGAAGC GCGACACGTG TGGGTCGGCG AAAAAACCCT GCCGGCGGTG ACCAACCTGC CGATCGGCGA CGCCTGCGAT TACTTCGGCG CGCTGAAGAT GACCGGCCGC CGTGGCGAAA TCGCCGACAA GATTCTCAAG GAAATTCGCG AGCGCCTGCA GTTTCTGGTC AACGTCGGTC TGGACTATCT GTCGCTGGAT CGCAGTGCCG ATACGTTGTC TGGCGGTGAA GCGCAGCGGA TTCGTCTGGC CAGCCAGATC GGCGCGGGCC TTGTGGGTGT TCTGTACATC CTCGACGAGC CGTCCATTGG CCTGCACCAG CGCGACAACG ATCGCCTGCT CGGCACCCTC AAACACCTGC GCGACATAGG CAACACGGTC ATCGTGGTAG AGCATGACGA AGACGCGATC CGCTTGGCCG ACTACGTAGT GGATATCGGC CCGGGTGCCG GCGTTCATGG CGGGCAGATC GTCGCCGAAG GCACGCCGGA CGAAGTCATG GCGCACCCGG ACTCGCTGAC CGGCAAATAC CTGTCGGGCC GGGTCAAGAT CGAAGTACCG GCCAAGCGCA CGCCGCGTAA CAAGAAGCAG GTGCTGTCGC TCAAGGGGGC GCGCGGCAAC AATCTGCGCA ACGTCGACCT GGAAATCCCG ATCGGCTTGC TGACCTGCGT GACCGGTGTC TCCGGCTCGG GCAAATCGAC GTTGATCAAC AACACGCTGT TCCCTTTGAG CGCCACGGCA CTCAATGGCG CGACCACCCT GGAAGCGGCA GCTCATGACA GCATCAAGGG CCTGGAGCAT CTGGACAAGG TCGTCGACAT CGACCAGAGC CCGATCGGTC GTACGCCACG TTCCAACCCG GCGACCTATA CCGGGCTGTT CACGCCGATT CGCGAACTGT TCGCCGGTGT GCCCGAATCC CGATCTCGTG GTTACGGCCC GGGGCGCTTC TCGTTCAACG TCAAGGGCGG TCGTTGCGAA GCCTGCCAGG GCGACGGTCT GATCAAGGTG GAAATGCACT TCCTGCCGGA CATCTACGTC CCGTGTGATG TGTGCAAGAG CAAGCGCTAC AACCGCGAAA CCCTGGAGAT CAAATATAAG GGCAAGAACA TCCACGAAAC TCTCGAGATG ACCATCGAGG AAGCGCGAGA GTTCTTCGAC GCGGTGCCGG CGCTGGCGCG CAAGCTGCAA ACGCTGATGG ATGTGGGGCT TTCGTACATC AAGCTTGGAC AATCGGCCAC GACGCTTTCC GGTGGTGAAG CGCAGCGGGT CAAGTTGTCC CGCGAGCTGT CCAAGCGCGA TACCGGCAAG ACCCTGTACA TCCTCGACGA GCCGACCACC GGCCTGCACT TCGCGGATAT CCAGCAACTG CTCGACGTAC TGCATCGCCT GCGCGACCAC GGCAACACCG TGGTGGTGAT CGAGCACAAC CTCGACGTGA TCAAAACCGC CGACTGGCTG GTGGATCTTG GCCCCGAGGG TGGTTCGAAA GGTGGTCAGA TCATCGCTAC CGGTACGCCG GAGGAAGTGG CCGAGATGAA ACAATCTCAC ACCGGGCATT ACCTCAAGCC GCTGCTGATC CGCGATCGGG CCTGA
|
Protein sequence | MDKILIRGAR THNLKNIDLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY ARQFLSMMEK PDVDTIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARVGTPRC PDHDIPLEAQ TVSQMVDLVL AQPEGSKLML LAPVIRERKG EHLSVFEELR AQGFVRARVN GRLCELDELP KLDKQKKHTI EVVVDRFKVR ADLQQRLAES FETALKLADG IALVAPMDDE PGEEMIFSAR FACPICGHAI SELEPKLFSF NNPAGACPTC DGLGVKQFFD IKRLVNGDLT LAEGAIRGWD RRNVYYFQML GSLAAHYGFS LEQPFNELPA DQQKYILHGS GSQNVDFKYL NDRGDIVKRS HPFEGIVPNL ERRYRETESA SVREELAKFL STQSCPDCRG TRLRREARHV WVGEKTLPAV TNLPIGDACD YFGALKMTGR RGEIADKILK EIRERLQFLV NVGLDYLSLD RSADTLSGGE AQRIRLASQI GAGLVGVLYI LDEPSIGLHQ RDNDRLLGTL KHLRDIGNTV IVVEHDEDAI RLADYVVDIG PGAGVHGGQI VAEGTPDEVM AHPDSLTGKY LSGRVKIEVP AKRTPRNKKQ VLSLKGARGN NLRNVDLEIP IGLLTCVTGV SGSGKSTLIN NTLFPLSATA LNGATTLEAA AHDSIKGLEH LDKVVDIDQS PIGRTPRSNP ATYTGLFTPI RELFAGVPES RSRGYGPGRF SFNVKGGRCE ACQGDGLIKV EMHFLPDIYV PCDVCKSKRY NRETLEIKYK GKNIHETLEM TIEEAREFFD AVPALARKLQ TLMDVGLSYI KLGQSATTLS GGEAQRVKLS RELSKRDTGK TLYILDEPTT GLHFADIQQL LDVLHRLRDH GNTVVVIEHN LDVIKTADWL VDLGPEGGSK GGQIIATGTP EEVAEMKQSH TGHYLKPLLI RDRA
|
| |