Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5048 |
Symbol | |
ID | 3713704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5683378 |
End bp | 5684535 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | glutathionylspermidine synthase |
Protein accession | YP_350776 |
Protein GI | 77461269 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.875853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0509044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA TCCACTGCGC CGAGCGCCAC GACTGGAAGC AGACCGCCGA AAGCCTCGGC TTTCTGTTTC ATACCATCGA CGACGAGCCG TACTGGGACG AGCGCGCCTA TTACCAGTTC ACGCTCGCAC AGATCGAAAA CGATCTGGAG GATCCAACCA CCGAGCTGCA CGAGATGTGC ATGGACCTGG TCGACCGCGT CGTGCACAGC GAAGAACTGC TGGGTCGCCT GAGCATTCCG GCGTCGTACT ACGACATGAT CCGAACGTCC TGGCTGGAAG GTCATCCGCA TCTGTACGGG CGCATGGACT TCTCCTACAG CGGCAATGGC CCGGCGAAGC TGCTCGAGCT CAACTACGAC ACGCCCACGA GTCTTTACGA AGCGTCGGCG TTCCAGTGGG GCTGGCTGGA GCAATGCATC GAGCGCGGGA TGCTGCCGCG CCATGCCGAC CAGTTCAACA GCATCGACAC CCGGCTGCAC GAAGCCTTTG CCCACCTGAA ACTCACGCGG CCGTTTTACT TCGCCTCGAT GAAAGACTCG GTCGAAGACA AGGGCACCAC GGATTACCTG CGGCTGATCG CAGAAAAGGT CGGCATCGAA TCGCGGCACA TCGATATCGA AGACATTGGC CTGAGCGCTG ACGGTCGTTT CGTGGATCTC GAGGATCGCT GGATCCCGCA CCTGTTCAAA CTGCACGCCT GGGAGTTCAT CTTCCACGAA CCGTTCGGCG CGGCGATCGC CGAATGCGAC ACCCAGTTTT TCGAACCGGC GTGGAAATCC ATTCTCTCCA ACAAGGGCGC CTTGCCGTTG CTTTGGGAAC TGCACAAGGG TCATCCGAAC CTGCTCGCCG CACATCTCGA TCCGAATCCG GGCAGCGCGG TGCCCAAGGG CTGGGTACGC AAGCCGTACT TCTCCCGGGA AGGTGCCAAC ATCGAGTTGC AGACAGCCGA AGGCCTGATC GTCAAAGAGG ATGGGCCCTA CACCGACGCG CCCTTCATCC TTCAGGAACT TGCCCCGTTG CCGAAGTTCG ACGACAGCTA CACGCTGATC GGCTCCTGGG TGATCGGCGA TCAGGCGGCG GGGATTGGCG TGCGCGAAGA CAACAGCCTG ATCACCAAGG ATTCGAGTCG GTTCCTGCCG CATCTGATTC TTGACTGA
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Protein sequence | MKKIHCAERH DWKQTAESLG FLFHTIDDEP YWDERAYYQF TLAQIENDLE DPTTELHEMC MDLVDRVVHS EELLGRLSIP ASYYDMIRTS WLEGHPHLYG RMDFSYSGNG PAKLLELNYD TPTSLYEASA FQWGWLEQCI ERGMLPRHAD QFNSIDTRLH EAFAHLKLTR PFYFASMKDS VEDKGTTDYL RLIAEKVGIE SRHIDIEDIG LSADGRFVDL EDRWIPHLFK LHAWEFIFHE PFGAAIAECD TQFFEPAWKS ILSNKGALPL LWELHKGHPN LLAAHLDPNP GSAVPKGWVR KPYFSREGAN IELQTAEGLI VKEDGPYTDA PFILQELAPL PKFDDSYTLI GSWVIGDQAA GIGVREDNSL ITKDSSRFLP HLILD
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