Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5040 |
Symbol | |
ID | 3713696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5676977 |
End bp | 5678083 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350768 |
Protein GI | 77461261 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.763439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00496845 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCCCGA CATCCCGCAG GAAAGTGGTC GTCGCCCATT CGGTTCGGCC CGGCGCACCA CAACATGAAG TGCAGACCAA CAAGGCCCTC GCGCGATGGC TGGCGCAGAT CCTCGGCCTC AAGTTCGGCG GCAGTTACGA CGCCGAAAAG CATCGCGGCC GGGATATTTA TCTGCTGCCG ACCCAGACCC TCGTCGGCGC GGCGGCCCGC GAACTGGGGG TGAGCGGCCC GGACGATTTG TGGGGCGGTT TCGTCGAGCA CGATTTCATC TGCACCAAAG CCATCAGCCA CGGTTTGCGC AGCCATCAGG CCCATGCGCC GCAAGGCTGG TCGCCCTTGT TTTCCGAGCG GGTGCGCACC GTGGTGCTGG ACGGGCTGAG TGTTTTTGCG CTGGAGGATG CACGGCCCGC CGCCGAACAT CTGTTGTACA GCGGGCCGAT CCGGATCAAG CCGATTCACG CCTGTGCCGG GCGGGGGCAG GAAGTGATCA AGAGCCTGGA TGCGTTCGAC GAAATCCTCG CCCGACCCGA GGCTAGAGAA TTGTTCAGCG ATGGCGTGGT GCTGGAGCAG GATTTGAGTC AGGTAGTTAC CCACAGCGTC GGCCAGTCGT TCATCGGCGG CAGGGTGCTG AGTTACTGCG GTGATCAATA CTTGACCAAG GACGCCCACG GCGAAGAGGT GTACGGCGGC TCGAACCTGC TGGTGGTGCA GGGCGGTTAC GAGGATCTGC TGGCGCTGGA TCTGCCCGAC GACGTGCGTC TGGCGATCCA GCAGGCGCAG GTGTTCGACC GGGCGGCGGA CGAGGCCTAT CCGCGTTTCT ACGCCTCGCG GCGCAATTAC GACATCGCCC AGGGCCTGGA CAGCGAAGGC CGGCCGCGCA GTGGCGTGCT CGAGCAGTCC TGGCGCATGG GCGGCGCCAG CAGCGCGGAA GTGGCGGCGC TGCAAAGTTT CGTCAACGAT CCTTCGATGC GCGCGATCCG CGTGTCGTCG GTGGAAACCT ATACCGATCA GGCCCTGCCG GCGGATGCCA TCGAGGTGTA TCGCGGGCCG GCCGAGAACA GCGACTTTCT CCTCAAATAC GTAACGGTCA AATCCTATGA CGGCTAG
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Protein sequence | MTPTSRRKVV VAHSVRPGAP QHEVQTNKAL ARWLAQILGL KFGGSYDAEK HRGRDIYLLP TQTLVGAAAR ELGVSGPDDL WGGFVEHDFI CTKAISHGLR SHQAHAPQGW SPLFSERVRT VVLDGLSVFA LEDARPAAEH LLYSGPIRIK PIHACAGRGQ EVIKSLDAFD EILARPEARE LFSDGVVLEQ DLSQVVTHSV GQSFIGGRVL SYCGDQYLTK DAHGEEVYGG SNLLVVQGGY EDLLALDLPD DVRLAIQQAQ VFDRAADEAY PRFYASRRNY DIAQGLDSEG RPRSGVLEQS WRMGGASSAE VAALQSFVND PSMRAIRVSS VETYTDQALP ADAIEVYRGP AENSDFLLKY VTVKSYDG
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