Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5039 |
Symbol | |
ID | 3713695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5676229 |
End bp | 5676987 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350767 |
Protein GI | 77461260 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00504479 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGGCTA GAAGCGAAAG CATTCAAATC GACATTGATG ATGAACAGAT GAGCGGGACG TTCCTCAGTC CCAAATCGAA AGTCCCCGGC GTGTTGTTCG TGCACGGCTG GGGCGGCAGT CAGGAGCGCG ATCTGGAGCG GGCCAAAGGC ATCGCCGGCC TGGGTTGCGT GTGCCTGACG TTCGACCTGC GCGGGCACAC TGGCGGCACC GGCATTCCGC TGAGCCGGGT CACTCGCGAA GACAACCTGC GTGACTTGCT GGCGGCCTAC GACCGGTTGC TCGCCCATCC GGCGCTGGAC ACTTCGGCCA TTGCGGTGGT GGGCACCAGC TATGGCGGTT ACCTCGCTTC AATTCTGACC TCGCTGCGCC CGGTGCGCTG GCTGGCGCTG CGGGTGCCGG CGCTGTACCG CGACGAGCAA TGGCACACGC CCAAGCGCGA TCTGGACAAG GCCGACCTGC GCGATTATCG CGGCACCCTG GTGCGCGCCG ACAGCAACCG CGCCTTGCAC GCCTGCTCGC AATTCACTGG CGACGTGCTG CTGGTGCAGT CGGAAACCGA CGACTACGTG CCCCACGCGA CGATCATGAG TTACCGCGCC GCGTGTCAGC AGACTCACTC GCTGACCCAC CGCATCATCG ATGGCGCCGA CCATGCCCTG AGCGATCCGA CCTCGCAGCA GGCCTACACC TCGATCCTGG TTGACTGGAT CACCGAGATG GTGGTGGGCG AGCGGTTGAG CATCATTCAG TCCCGCTGA
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Protein sequence | MTARSESIQI DIDDEQMSGT FLSPKSKVPG VLFVHGWGGS QERDLERAKG IAGLGCVCLT FDLRGHTGGT GIPLSRVTRE DNLRDLLAAY DRLLAHPALD TSAIAVVGTS YGGYLASILT SLRPVRWLAL RVPALYRDEQ WHTPKRDLDK ADLRDYRGTL VRADSNRALH ACSQFTGDVL LVQSETDDYV PHATIMSYRA ACQQTHSLTH RIIDGADHAL SDPTSQQAYT SILVDWITEM VVGERLSIIQ SR
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