Gene Pfl01_5039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5039 
Symbol 
ID3713695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5676229 
End bp5676987 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350767 
Protein GI77461260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00504479 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGGCTA GAAGCGAAAG CATTCAAATC GACATTGATG ATGAACAGAT GAGCGGGACG 
TTCCTCAGTC CCAAATCGAA AGTCCCCGGC GTGTTGTTCG TGCACGGCTG GGGCGGCAGT
CAGGAGCGCG ATCTGGAGCG GGCCAAAGGC ATCGCCGGCC TGGGTTGCGT GTGCCTGACG
TTCGACCTGC GCGGGCACAC TGGCGGCACC GGCATTCCGC TGAGCCGGGT CACTCGCGAA
GACAACCTGC GTGACTTGCT GGCGGCCTAC GACCGGTTGC TCGCCCATCC GGCGCTGGAC
ACTTCGGCCA TTGCGGTGGT GGGCACCAGC TATGGCGGTT ACCTCGCTTC AATTCTGACC
TCGCTGCGCC CGGTGCGCTG GCTGGCGCTG CGGGTGCCGG CGCTGTACCG CGACGAGCAA
TGGCACACGC CCAAGCGCGA TCTGGACAAG GCCGACCTGC GCGATTATCG CGGCACCCTG
GTGCGCGCCG ACAGCAACCG CGCCTTGCAC GCCTGCTCGC AATTCACTGG CGACGTGCTG
CTGGTGCAGT CGGAAACCGA CGACTACGTG CCCCACGCGA CGATCATGAG TTACCGCGCC
GCGTGTCAGC AGACTCACTC GCTGACCCAC CGCATCATCG ATGGCGCCGA CCATGCCCTG
AGCGATCCGA CCTCGCAGCA GGCCTACACC TCGATCCTGG TTGACTGGAT CACCGAGATG
GTGGTGGGCG AGCGGTTGAG CATCATTCAG TCCCGCTGA
 
Protein sequence
MTARSESIQI DIDDEQMSGT FLSPKSKVPG VLFVHGWGGS QERDLERAKG IAGLGCVCLT 
FDLRGHTGGT GIPLSRVTRE DNLRDLLAAY DRLLAHPALD TSAIAVVGTS YGGYLASILT
SLRPVRWLAL RVPALYRDEQ WHTPKRDLDK ADLRDYRGTL VRADSNRALH ACSQFTGDVL
LVQSETDDYV PHATIMSYRA ACQQTHSLTH RIIDGADHAL SDPTSQQAYT SILVDWITEM
VVGERLSIIQ SR