| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5032 |
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| Symbol | |
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| ID | 3713766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5664341 |
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| End bp | 5668636 |
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| Gene Length | 4296 bp |
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| Protein Length | 1431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_350760 |
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| Protein GI | 77461253 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.21227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC CCCTCCCCAA GGACGCGGCC CTGGCAGGCT TCCACCCCGC CGTCAGCGCC
TGGTTCAGCA GCACCTTCCC GACGGTGACG GCCGCCCAGG CCCGCGCATG GCCATTGATC
CGCCAGCGCC GCTCGACGCT GATCGCCGCG CCCACTGGTT CCGGCAAGAC CCTCACCGCG
TTCCTCGCGG TGCTCGACGA TCTGGTCCAC CGTGGCCTGG AAACCCCGGA CGGTCTGCCG
GACGAAACCC TGGTGGTCTA CATTTCGCCG CTCAAGGCGC TGTCCAACGA CATCCGCATC
AATCTGCAGA ACCCTCTGGC CGGGATTACC GACCAGTTAC GCCAAATGGA CCTGCCGGCG
CTGGAAATCA CCACCGCCGT GCGCACCGGC GACACCCCGC AGAAAGACCG CGCCGCCATG
CGCAAGAGCG CGCCGCACAT ATTGGTGACC ACCCCGGAAT CGCTCTACGT GCTGCTCGGC
TCCGAGTCCG GCCGCAAAAT GCTCGGTACC ACGCGCACGG TGATCGTCGA TGAAATCCAC
GCCATCGCCG CCGGCAAACG CGGCAGTCAC CTGGCCTTGA GTCTCGAACG CTTGCAGGCG
CTGTGCGCCG AACCACTGAC CCGCGTCGGT CTGTCGGCCA CGCAAAAACC GATCGATGCG
GTCGCGCGGT TTCTGGTCGG CCATGACCGC CCGTGCGAAA TCATCGATAT CGGCCACGCG
CGCCCACGGG ATCTGGGCAT CGAAGTGCCG CCGGTGCCAT TGTCGGCCGT GATGGCCAAT
GACGTCTGGG AACTGGTTTA TGACCGCCTC GCCACACTGG CTCGTGAACA CCGCACCACG
CTGATTTTCG TCAACACCCG ACGTCTGGCC GAACGCTTGA GCCGACACCT GAGCGAACGC
CTCGGCAAAC AGGCGGTGGC GGCGCACCAC GGCAGTCTGG CCAAAGAGTT TCGACTCGAT
GCGGAACAGC GGCTCAAGCG CGGCGAGTTG CAAGTGCTGA TCGCCACCGC GTCGCTGGAA
CTGGGGATCG ACATCGGCGA AGTCGACCTC GTCTGCCAGA TCGCTTCACC GCGCTCGATT
GCCGGTTTTC TGCAACGGGT CGGCCGCTCC GGGCACCAGG TCGGCGGCAC ACCCAAGGGG
CGCCTGTTCG CCACCACCCG CGACGACCTG ATCGAATGCG CCGCGCTGCT CGACTGCGTG
CGCCGGGGTG AACTCGATAC GCTGCACATC CCCGAAGCGC CGCTGGATGT GCTGGCGCAG
CAGATCATCG CCGAGGTCAG TTGCCAGGAG TGGGCCGAGG ACGATTTGCT CGCGCTGCTG
CGCCGAGCCG AGCCCTACGC CCGCCTCGAC GAAAAACACT TTCAGGCACT GCTGGGCATG
CTCGCCGAGG GCTACAACGG CCGTCAGGGC ATCCGCAGCG CCTACCTGCA CCGCGACGCC
GTCAGCCGAA CCCTGCGCGG ACGACGCGGT GCAAGGCTGA CGGCAGTCAC CAGCGGCGGC
ACTATCCCCG ACAACGCCGA CTACAGCGTT TTGCTCGAAC CTCAGGGCCT GAACATCGGC
AGCGTCAACG AAGACTTCGC CGTGGAAAGC ATCGCCGGCG ATGTGTTCCA ACTCGGCAAC
GCTTCTTATC GGATCCTGCG GGTGGAGGCC GGCAAGGTGC GGGTCGAGGA CGCTCAAGGC
CAGCCACCGA CCATTCCGTT CTGGCTCGGC GAGGCGCCGG GGCGCAGCGA CGAATTGTCG
GCGGCCGTGG CGCGCCTGCA CGCGCAGCTC GATCAATTGC TCAGCGCCAG CCCCGGCAAC
CTGCAACCGG CCCTCGACTG GCTGACCGAC ACCCTCGGCC TGAACCTGGC CAGCGCCGAA
CAACTGGTGG ATTACCTGGC CCGCGCCCGC CTCGCCCTCG GCGCCCTGCC GTCGAAGGAC
ACGCTGCTGA TGGAGCGTTT TTTCGACGAG TCCGGCGGCA CCCAACTGAT CATCCATTCG
CCGTTCGGCA GCCGCATCAA CCGCGCCTGG GGCCTGGCCC TGCGCAAGCG TTTCTGCCGC
ACTTTCAACT TCGAATTGCA GGCAGCCGCC AGCGAAGACG CGATCGTGCT GTCGCTGTCC
ACCAGCCACA GTTTCGAACT CGATGAAGTC TGGCGTTACC TGCACAGCAA CAGCGCCGAG
CACATTCTGA TTCAAGCGGT GCTGGATGCG CCGCTGTTCG GCGTGCGCTG GCGCTGGAAT
GCCGGGGTGG CGCTGGCCCT GCCGCGGTTT ACCGGCGGGC GCAAGGTCGC GCCGCAATTG
CAGCGGATGA AAAGCGAAGA CCTGATCGCC AGCGTGTTTC CCGATCAGAT CGCCTGCCTG
GAAAACCTCG CCGGTGAACG GGAAATTCCC CAGCATCCGC TGGTGGAACA GACCCTCGAC
GATTGCCTGC ACGAAGCGAT GGACAGCGAA GGCTGGCTCG AACTGCTGCG GCGCATGGAG
CGCGGCGAAG TGCGCCTGAT CGCCCGTGAC CTGCCGGCGC CCTCGCCGTT GGCGGCGGAA
ATCCTCAGTG CCCGCCCTTA CACCTTTCTC GACGATGCGC CGCTGGAAGA GCGTCGCACC
CAGGCAGTGC TCAACCGCCG CTGGAGTGAT CCGCAATCCG CCGATGACCT CGGCGCGCTG
GACGCCGACG CGATCAACGC CGTGCGCGAA GAAGCCTGGC CGACGCCGAA CAGCGCCGAT
GAAATGCACG AAGCATTGAT GAGCCTGGCC TGCATCAGCG ACCGCGAAGT CGAGGCAAAT
CCGCAGTGGC ACGACTGGCT GAATGACCTG GCCGATACCG GGCGAGCCTG CCGATTGCAG
ATCGGTCCCG AGCATTCACT GTGGCTGGCA AGAGAACGCC TGACCTGTCT GCAAGCGCTT
TATCCACAGG CGCAGTCGGC ACTGCCCGCG CTGCCCGGTT TCGACGAAGC ATGGACGGCC
GATGACGCAC TGATCGAAGT GATCCGCGCG CGGCTCGGCG CATTCGGACC GCTACCGCTG
GCGGCGATTG CCGTTCCGCT GGCGTTGATG CTGGCCTCTG TTCATCAAGC CCTCGCTCAT
CTGGAGCGCG AAGGTTACGT ACTACGCGGC CAGTTCACGC CTGGATCGAC CGTTGAGGAA
TGGTGCGAAC GCCATCTGCT GGCGCGCATT CACCGCTACA CGGTCAAGCG TCTGCGCCGG
GAAATCGAGC CGGTGGCGTT GCAGGATTTC ATGCGGTTTC TGTTCGACTG GCAGCACGTG
TCCCCGTCCA CCCGTGGTCA GGGCAACGCC GTATTGCCGG CGATTGTCGC TCAGTTCGAG
GGCTACCCGG CCGCTGCTTC AGCCTGGGAC AGCGACCTCC TTCCCGCGCG GCTCAAGGAC
TATTCACCGA GCTGGCTGGA CGATCTGTGC CGCAGCGGCA AACTGGTGTG GACGCGCCTC
AGCGCCCGGC AAAACATCAG CGGCACGGCG TTGCGCAGTA CACCGATCGT GTTGCTGCCA
CGCAGTCAGG TCGGCTTGTG GAGTGCACTG GCCGAGCAGA CGCCGGTCAG CGAACTGTCG
CCCAAGACCC GCAAGGTTTT CGACGCGCTG AACCAGCACG GCGCGCTGTT TTTCGATGAG
CTGATACATG AAGCGCACCT GCTGCGCACC GAGCTGGAAA TCGCCTTGCA GGAACTGGTC
GGCGCCGGGC TGGTGAATGC CGACAGCTTT GCCGGATTGC GGGCGCTGAT CACCCCGGCG
AGCAAGCGCC AGCAGCGCAG CAGTCGACGC GGGCGCGGGG CGTTTGTCGG TGGGATGGAC
GACGCCGGGC GCTGGGCGCT TTTGCGTCGC GGGCCGGTGG TGGAAAGCCG TCAAACGGCG
TCGCCCGAAA CCCTAGAACA CATCGCCATG ACCTTGTTGC GCCGCTATGG CGTGGTGTTC
TGGCGCCTGC TGGAACGTGA GGCCGACTGG CTGCCGAGCT GGCGCGAACT GCTGCGCACG
TTCCATCGAC TGGAGGCGCG CGGCGAGATT CGTGGCGGGC GGTTTGTCAG CGGTCTGGCC
GGCGAGCAAT TCGCCCTGCC CGAGGCAATT CCGCTGCTGC GCGAAGTCCG CCGGCGCCCC
CATGACGGCA GCCTGATTGC GGTGTGCGGC GTCGATCCGC TGAACCTCGC CGGGACCTTG
CTGCCGGGGG CGAAAGTGCC GGCGCTGGCG AGCAATCGGC TGGTGTATCG CGACGGGTTG
CCGGTCGCTG CCGAGGTCGC GGGCAAGCCG CAATTCTGGG TGGAGCTGGA CTCCGCCGCC
ATGATCGAAA TCCGCAACAG GCTGACCCGT CACTGA
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| Protein sequence | MNLPLPKDAA LAGFHPAVSA WFSSTFPTVT AAQARAWPLI RQRRSTLIAA PTGSGKTLTA
FLAVLDDLVH RGLETPDGLP DETLVVYISP LKALSNDIRI NLQNPLAGIT DQLRQMDLPA
LEITTAVRTG DTPQKDRAAM RKSAPHILVT TPESLYVLLG SESGRKMLGT TRTVIVDEIH
AIAAGKRGSH LALSLERLQA LCAEPLTRVG LSATQKPIDA VARFLVGHDR PCEIIDIGHA
RPRDLGIEVP PVPLSAVMAN DVWELVYDRL ATLAREHRTT LIFVNTRRLA ERLSRHLSER
LGKQAVAAHH GSLAKEFRLD AEQRLKRGEL QVLIATASLE LGIDIGEVDL VCQIASPRSI
AGFLQRVGRS GHQVGGTPKG RLFATTRDDL IECAALLDCV RRGELDTLHI PEAPLDVLAQ
QIIAEVSCQE WAEDDLLALL RRAEPYARLD EKHFQALLGM LAEGYNGRQG IRSAYLHRDA
VSRTLRGRRG ARLTAVTSGG TIPDNADYSV LLEPQGLNIG SVNEDFAVES IAGDVFQLGN
ASYRILRVEA GKVRVEDAQG QPPTIPFWLG EAPGRSDELS AAVARLHAQL DQLLSASPGN
LQPALDWLTD TLGLNLASAE QLVDYLARAR LALGALPSKD TLLMERFFDE SGGTQLIIHS
PFGSRINRAW GLALRKRFCR TFNFELQAAA SEDAIVLSLS TSHSFELDEV WRYLHSNSAE
HILIQAVLDA PLFGVRWRWN AGVALALPRF TGGRKVAPQL QRMKSEDLIA SVFPDQIACL
ENLAGEREIP QHPLVEQTLD DCLHEAMDSE GWLELLRRME RGEVRLIARD LPAPSPLAAE
ILSARPYTFL DDAPLEERRT QAVLNRRWSD PQSADDLGAL DADAINAVRE EAWPTPNSAD
EMHEALMSLA CISDREVEAN PQWHDWLNDL ADTGRACRLQ IGPEHSLWLA RERLTCLQAL
YPQAQSALPA LPGFDEAWTA DDALIEVIRA RLGAFGPLPL AAIAVPLALM LASVHQALAH
LEREGYVLRG QFTPGSTVEE WCERHLLARI HRYTVKRLRR EIEPVALQDF MRFLFDWQHV
SPSTRGQGNA VLPAIVAQFE GYPAAASAWD SDLLPARLKD YSPSWLDDLC RSGKLVWTRL
SARQNISGTA LRSTPIVLLP RSQVGLWSAL AEQTPVSELS PKTRKVFDAL NQHGALFFDE
LIHEAHLLRT ELEIALQELV GAGLVNADSF AGLRALITPA SKRQQRSSRR GRGAFVGGMD
DAGRWALLRR GPVVESRQTA SPETLEHIAM TLLRRYGVVF WRLLEREADW LPSWRELLRT
FHRLEARGEI RGGRFVSGLA GEQFALPEAI PLLREVRRRP HDGSLIAVCG VDPLNLAGTL
LPGAKVPALA SNRLVYRDGL PVAAEVAGKP QFWVELDSAA MIEIRNRLTR H
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