Gene Pfl01_5025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5025 
Symbol 
ID3713759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5658208 
End bp5658801 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350753 
Protein GI77461246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.966259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTC TGCTCCTCGC TTTGCCGTTT GCCCTGTTGC CGCTGGCCAT CGCCCAGGCT 
GCCGATGAAC ATGATCACGA CCATGAGCAC GGCAGCCTCG GTGCCCACGA ACATGGCGTC
GGTCGCCTGA ACGCCGCGCT GGACGGCCAG ACCCTGGAAC TGGAGCTGGA AAGCCCGGCA
ATGAACCTAG TCGGTTTTGA GCACGTCGCC ACCAACGATG CCGACAAGGC CAAGGTCGCA
GCCGCCCGCG CGCAACTGGA AAAACCGCAG GCGCTGTTCA GTCTGCCGGC CGCCGCCGGT
TGCAAAGTCA CCCATCAGGA GCTGGAAAGC CCGCTGTTCG GCGACAAGCC GGATGCCGAC
GATCACGACG AAGAAGAAGC CGGCAAGGAC GGTCACGAGC ATCATCACGA CCACAGCGAA
ATCCACGCCC ACTACCAGTT CAGCTGCGCG GCACCGGGTG CGTTGAAAAC CCTGGATCTG
GCGAACCTGT TCAATACCTT CCCGGCCACC CAGAAAATTC AGGTACAACT GATCGGCCCG
AGCGGCCAGC AAGGCACGGA AGTGACGGCC AAGGCCGCCG CCCTGAAGTT CTGA
 
Protein sequence
MRRLLLALPF ALLPLAIAQA ADEHDHDHEH GSLGAHEHGV GRLNAALDGQ TLELELESPA 
MNLVGFEHVA TNDADKAKVA AARAQLEKPQ ALFSLPAAAG CKVTHQELES PLFGDKPDAD
DHDEEEAGKD GHEHHHDHSE IHAHYQFSCA APGALKTLDL ANLFNTFPAT QKIQVQLIGP
SGQQGTEVTA KAAALKF