Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5020 |
Symbol | nrdR |
ID | 3713754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5655087 |
End bp | 5655551 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | transcriptional regulator NrdR |
Protein accession | YP_350748 |
Protein GI | 77461241 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.582624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTGTC CCTTCTGCGG TGCCAACGAC ACCAAGGTCA TCGACTCGCG TCTGGTCGCC GAGGGCGAAC AGGTGCGCCG CCGGCGTGAA TGCCTGGCCT GCGGCGAACG TTTCACGACG TTCGAGACGG CCGAACTGGT GTTGCCGCGC CTGATCAAAA CCGACGGCAG CCGCCAACCG TTCGACGAAG AAAAACTCCG CGCCGGCATG CAACGCGCCC TGGAGAAACG TCCGGTGAGC GTCGAGCGCC TCGAATCCTC GCTGGTCCAT ATCAAGCACA AGCTGCGCGC CACCGGCGAG CGCGAGGTCA AATCCCTCGT GGTCGGCGAA CTGGTGATGG CCGAGCTGCA AAAGCTCGAT GAAGTCGCCT ACATCCGTTT CGCTTCCGTG TACCGCCGCT TCCAGGACCT CAACGAATTC CGCGAAGAGA TCGACCGCCT CGCCCGTGAA CCGGTGAAAG AATGA
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Protein sequence | MHCPFCGAND TKVIDSRLVA EGEQVRRRRE CLACGERFTT FETAELVLPR LIKTDGSRQP FDEEKLRAGM QRALEKRPVS VERLESSLVH IKHKLRATGE REVKSLVVGE LVMAELQKLD EVAYIRFASV YRRFQDLNEF REEIDRLARE PVKE
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