Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5016 |
Symbol | ribH |
ID | 3713750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5651574 |
End bp | 5652050 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_350744 |
Protein GI | 77461237 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.389314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGA AGACCATCGA AGGTACCTTC ATCGCCCCTA AAGGCCGCTA CGCTTTGGTA GTGGGCCGCT TCAACAGCTT CGTGGTTGAA AGCCTGGTCA GCGGTGCAGT TGATGCCCTG GTTCGCCACG GCGTGAGCGA AAGCGACATC ACCATCATCC GCGCACCTGG CGCCTTCGAA ATCCCGCTGG TTGCGCAGAA AGTCGCCCAG AAAGGCGAGT TCGCAGCAAT CATCGCCCTG GGCGCGGTCA TTCGTGGCGG CACTCCACAC TTCGAATACG TGGCGGGCGA GTGCACCAAG GGCCTGGCCC AGGTGTCCAT GGAGTTCGGC GTACCGGTCG CTTTCGGCGT CCTGACCGTT GATTCCATCG AGCAAGCCAT CGAACGTTCC GGCACCAAGG CCGGCAACAA AGGTGCTGAA GCTGCCCTGT CCGCTCTGGA AATGGTCAGC CTGCTGGCGC AGTTGGAGGC CAAGTGA
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Protein sequence | MTLKTIEGTF IAPKGRYALV VGRFNSFVVE SLVSGAVDAL VRHGVSESDI TIIRAPGAFE IPLVAQKVAQ KGEFAAIIAL GAVIRGGTPH FEYVAGECTK GLAQVSMEFG VPVAFGVLTV DSIEQAIERS GTKAGNKGAE AALSALEMVS LLAQLEAK
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