Gene Pfl01_5003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5003 
Symbol 
ID3714669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5639412 
End bp5640203 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350731 
Protein GI77461224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.734058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCAC TTCTTTTGCT GCTGATCGGC CTGGCCTGCG TGCCGGCGCT GTCGGCTGCA 
CCGAGTGCCG AGATGTCGGA ACCGGTGGGC GGCTGGCGCT ATCACGGGCT GCTCGATCGC
ACGGAAAACC CGCAGGTCGC CTATCCCACG CCGCCCATCG ATCGCGGCAT CCAGCGCAAT
CGCACGATGA TCGAGGGTCA GCTCAAGGCC ATCGGGCATT TGCGTCCGCC GCACAGCCTG
GCGGTGAATG GCAATCCACT GAATCTGTAC ACCGACGACC AGGGCCGTTT TGCCCGGCCG
TATGCGTTTG GCGCCGGTTC CAACAGTGTC GAGGTGATCA GCGCCGACGG CCAGTCGCTC
AAGCGCGTTC AATTCTACGA AGCCAACAAT TTGCGCACGC CGGCGCGGAT CCGCGTGGTG
CTCGGTTGGG ACGACCCTAA AGCCGAACTC GACCTGCACG TCATTACGCC TGACGGCCAG
CACGCCTTCT GGGCGCGGCC GGCGATGAGC AACGGCGGCG GCCTCGATCC GGACGGCGTC
GATGGCCCCG GCCCGGAAAT GTTCACCATG ACTGCGCCGC TGCACGGCAC CTATCTGGTT
TACGTCAACT ATTGGGGCAA CTTCGGTAAC GGCGGCTATA ACTTCGAGGA GACCAGCAAC
CAGAACGAGG TGATCACCTC GCAGATCACG CTGGTGCTCA ACGAAAACAC CGTCGACGAA
AAACGCGAAA CGTTCATCGT GCCCCTGCGG GCCATCGGTG ATCTGCTGCT GGTCAAGACT
TTCAACTATT AA
 
Protein sequence
MRSLLLLLIG LACVPALSAA PSAEMSEPVG GWRYHGLLDR TENPQVAYPT PPIDRGIQRN 
RTMIEGQLKA IGHLRPPHSL AVNGNPLNLY TDDQGRFARP YAFGAGSNSV EVISADGQSL
KRVQFYEANN LRTPARIRVV LGWDDPKAEL DLHVITPDGQ HAFWARPAMS NGGGLDPDGV
DGPGPEMFTM TAPLHGTYLV YVNYWGNFGN GGYNFEETSN QNEVITSQIT LVLNENTVDE
KRETFIVPLR AIGDLLLVKT FNY