Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4997 |
Symbol | |
ID | 3714663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5628581 |
End bp | 5629321 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_350725 |
Protein GI | 77461218 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.357527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGA ACACTAGCGG TCCAAGATTC AAGGCACTCC TGGAAGCTGC GAACATCACC ACCACGGGAT TCGCAAAGTT CTGGGGCACG GAAGCCCAAA ACGTTCATAA CTGGTACACC CGGGGCGTAC CCGCGTACCG CATGGAAGAA GTCGCGCGCC TGCTGTCCGT CAACAGCCAA TGGCTGAAGA CCGGCGAAGG CCCGAAAGAC GCCCCGCACC TGCATACGGA GTCGGGCGAC ATCCTCGATG CCCATGCCAT TCGCGGCGTC TACACGGTGC TAGAAACCAA CGACATCGAA TTGCCGCTCT ACAAAGAAAC CCCGGTCGCC CCCGGCTCCG ACAAAACCCA TGTCATAAAA GACCCGGAGC AAACCATCCG CCTGCCCCGC AGTCACCTCG AAACACTGGA AATCCGCTAC ACCGACGCCA TTTGCACCCA CATGATCGGC AACAGCATGG CCGAGAAAAT CGAAGACGGC TCCACCCTCG CCATCGACCG CGGCCTCACC CAGGTGGTTG ACGGCGAAAT CTACGCCATT GAGCACGACG GCATGTTGCG TATCAAATAC CTGCACCGCA TGCCCGGCAA CGCCCTGCGC CTGCGCAGCC ACAACAGCGC CGAATACCCG GACGAGATCT TCCGGGCCTC ACAGATCGAA GAGCAGAGGA TTCATGTGTT GGGGTGGGTG TTCTGGTGGT CGACGCTGGG CAAGCGGCGG CCGGTGGTGC CGTTTCTCTG A
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Protein sequence | MRKNTSGPRF KALLEAANIT TTGFAKFWGT EAQNVHNWYT RGVPAYRMEE VARLLSVNSQ WLKTGEGPKD APHLHTESGD ILDAHAIRGV YTVLETNDIE LPLYKETPVA PGSDKTHVIK DPEQTIRLPR SHLETLEIRY TDAICTHMIG NSMAEKIEDG STLAIDRGLT QVVDGEIYAI EHDGMLRIKY LHRMPGNALR LRSHNSAEYP DEIFRASQIE EQRIHVLGWV FWWSTLGKRR PVVPFL
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