Gene Pfl01_4990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4990 
Symbol 
ID3714948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5621769 
End bp5623139 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content62% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionYP_350718 
Protein GI77461211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA CCACACAGCT CAAACCCACA CTCGGCACCC TGCATCTCTG GGGCATTGCC 
GTCGGCCTGG TGATTTCCGG CGAATACTTC GGCTGGAGTT ACGGCTGGGG CACGGCAGGA
ACCCTGGGTT TCCTGGTCAC AGCCCTGATG GTCGCGACCA TGTACACCTG CTTCATCTTC
AGTTTCACCG AACTGACCAC CGCGATTCCT CACGCGGGCG GGCCGTTTGC CTACAGCCGC
CGGGCGTTCG GCGAGAAAGG CGGATTGATC GCCGGCATCG CCACCCTGAT CGAATTCGTG
TTCGCCCCGC CGGCCATCGC TATGGCCATC GGCGCCTATC TGAATGTGCA ATATCCGGGG
CTCGATCCGA AACTCGCGGC AGTCGGCGCG TATTTCGTGT TCATGACACT GAACATTCTT
GGCGTCAGCA TCGCCGCGAC CTTTGAGCTG GTGGTGACCG TGCTCGCCGT CGCCGAACTG
CTGGTGTTCA TGGGCGTGGT CGCGCCGGGC TTCAGCTTCA GCAACTTCGT TTTGAACGGC
TGGTCAGGCG CCAATGAATT CACGATGGGT TCGATTCCGG GCATTTTCGC GGCGATTCCC
TTCGCGATCT GGTTCTTCCT CGCCATCGAA GGCGCAGCCA TGGCGGCCGA GGAAGCCAAG
GACCCGAAAC GCACGATTCC ACGGGCCTAC GTCAGTGGCA TCCTGACCCT GGTGTTCCTG
GCCATCGGCG TGATGGTGAT GGCCGGCGGC GTCGGTGACT GGCGCCAACT GTCGAACATC
AACGACCCGC TGCCGCAAGC GATGAAAGCG GTGGTCGGCA ACAATTCGAC CTGGATGCAC
ATGCTGGTGT GGATCGGCCT GTTCGGGCTG GTGGCGAGTT TCCACGGGAT CATCCTCGGC
TACTCGCGGC AGTTCTTCGC CCTGGCCCGG GCCGGTTATC TGCCCAAAGG CCTGGCCAAA
CTCTCGCGCT TCCAGACCCC GCACCGGGCG ATTCTGGCCG GCGGCGTGGT CGGCATCGCG
GCGATCTACA GCGACGGCCT GGTCAATCTG CAAGGCATGA CCCTGACGGC GGCGATGATC
ACCATGTCGG TGTTCGGCGC CATCGTGATG TACATCATCA GCATGCTCAG CCTGTTCAAA
CTGCGTAAAA CCGAGCCGAA CCTGGAGCGC ACCTTCCGCG CGCCGGGCTA TCCGGTGGTG
CCGGCCATCG CGCTGTTCCT GGCCGTGGTG TGTCTGGTGG CGATGGCCTG GTTCAACACG
CTGATCGGCT GCGTGTTCCT CGGTTTCATG GCCGCCGGCT ATCTGTACTT TCAGCTGACC
GCCAAGCAAC GCTCCGAAGC ACCGGCAGAC GCTATGCTCG AAGGTATCTA G
 
Protein sequence
MTSTTQLKPT LGTLHLWGIA VGLVISGEYF GWSYGWGTAG TLGFLVTALM VATMYTCFIF 
SFTELTTAIP HAGGPFAYSR RAFGEKGGLI AGIATLIEFV FAPPAIAMAI GAYLNVQYPG
LDPKLAAVGA YFVFMTLNIL GVSIAATFEL VVTVLAVAEL LVFMGVVAPG FSFSNFVLNG
WSGANEFTMG SIPGIFAAIP FAIWFFLAIE GAAMAAEEAK DPKRTIPRAY VSGILTLVFL
AIGVMVMAGG VGDWRQLSNI NDPLPQAMKA VVGNNSTWMH MLVWIGLFGL VASFHGIILG
YSRQFFALAR AGYLPKGLAK LSRFQTPHRA ILAGGVVGIA AIYSDGLVNL QGMTLTAAMI
TMSVFGAIVM YIISMLSLFK LRKTEPNLER TFRAPGYPVV PAIALFLAVV CLVAMAWFNT
LIGCVFLGFM AAGYLYFQLT AKQRSEAPAD AMLEGI