Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4990 |
Symbol | |
ID | 3714948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5621769 |
End bp | 5623139 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | YP_350718 |
Protein GI | 77461211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA CCACACAGCT CAAACCCACA CTCGGCACCC TGCATCTCTG GGGCATTGCC GTCGGCCTGG TGATTTCCGG CGAATACTTC GGCTGGAGTT ACGGCTGGGG CACGGCAGGA ACCCTGGGTT TCCTGGTCAC AGCCCTGATG GTCGCGACCA TGTACACCTG CTTCATCTTC AGTTTCACCG AACTGACCAC CGCGATTCCT CACGCGGGCG GGCCGTTTGC CTACAGCCGC CGGGCGTTCG GCGAGAAAGG CGGATTGATC GCCGGCATCG CCACCCTGAT CGAATTCGTG TTCGCCCCGC CGGCCATCGC TATGGCCATC GGCGCCTATC TGAATGTGCA ATATCCGGGG CTCGATCCGA AACTCGCGGC AGTCGGCGCG TATTTCGTGT TCATGACACT GAACATTCTT GGCGTCAGCA TCGCCGCGAC CTTTGAGCTG GTGGTGACCG TGCTCGCCGT CGCCGAACTG CTGGTGTTCA TGGGCGTGGT CGCGCCGGGC TTCAGCTTCA GCAACTTCGT TTTGAACGGC TGGTCAGGCG CCAATGAATT CACGATGGGT TCGATTCCGG GCATTTTCGC GGCGATTCCC TTCGCGATCT GGTTCTTCCT CGCCATCGAA GGCGCAGCCA TGGCGGCCGA GGAAGCCAAG GACCCGAAAC GCACGATTCC ACGGGCCTAC GTCAGTGGCA TCCTGACCCT GGTGTTCCTG GCCATCGGCG TGATGGTGAT GGCCGGCGGC GTCGGTGACT GGCGCCAACT GTCGAACATC AACGACCCGC TGCCGCAAGC GATGAAAGCG GTGGTCGGCA ACAATTCGAC CTGGATGCAC ATGCTGGTGT GGATCGGCCT GTTCGGGCTG GTGGCGAGTT TCCACGGGAT CATCCTCGGC TACTCGCGGC AGTTCTTCGC CCTGGCCCGG GCCGGTTATC TGCCCAAAGG CCTGGCCAAA CTCTCGCGCT TCCAGACCCC GCACCGGGCG ATTCTGGCCG GCGGCGTGGT CGGCATCGCG GCGATCTACA GCGACGGCCT GGTCAATCTG CAAGGCATGA CCCTGACGGC GGCGATGATC ACCATGTCGG TGTTCGGCGC CATCGTGATG TACATCATCA GCATGCTCAG CCTGTTCAAA CTGCGTAAAA CCGAGCCGAA CCTGGAGCGC ACCTTCCGCG CGCCGGGCTA TCCGGTGGTG CCGGCCATCG CGCTGTTCCT GGCCGTGGTG TGTCTGGTGG CGATGGCCTG GTTCAACACG CTGATCGGCT GCGTGTTCCT CGGTTTCATG GCCGCCGGCT ATCTGTACTT TCAGCTGACC GCCAAGCAAC GCTCCGAAGC ACCGGCAGAC GCTATGCTCG AAGGTATCTA G
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Protein sequence | MTSTTQLKPT LGTLHLWGIA VGLVISGEYF GWSYGWGTAG TLGFLVTALM VATMYTCFIF SFTELTTAIP HAGGPFAYSR RAFGEKGGLI AGIATLIEFV FAPPAIAMAI GAYLNVQYPG LDPKLAAVGA YFVFMTLNIL GVSIAATFEL VVTVLAVAEL LVFMGVVAPG FSFSNFVLNG WSGANEFTMG SIPGIFAAIP FAIWFFLAIE GAAMAAEEAK DPKRTIPRAY VSGILTLVFL AIGVMVMAGG VGDWRQLSNI NDPLPQAMKA VVGNNSTWMH MLVWIGLFGL VASFHGIILG YSRQFFALAR AGYLPKGLAK LSRFQTPHRA ILAGGVVGIA AIYSDGLVNL QGMTLTAAMI TMSVFGAIVM YIISMLSLFK LRKTEPNLER TFRAPGYPVV PAIALFLAVV CLVAMAWFNT LIGCVFLGFM AAGYLYFQLT AKQRSEAPAD AMLEGI
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