| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4988 |
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| Symbol | |
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| ID | 3714946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5617831 |
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| End bp | 5619747 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | sigma54 specific transcriptional regulator |
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| Protein accession | YP_350716 |
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| Protein GI | 77461209 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA ACCATTTGAG TCGCCATGCC CAACAGGTTC TCACCGTCAC CCAGGGCAAG
CCGCACCTGC ATGGCCCCGG TGCCGACCCG TCGATTGCCC GCTCGTGGCT GCGTTGTCTT
GAGGACTATC ACCTCGACCC GGCCCTGACC ATGGCGCCGA CCGTGCTAGA ACACGGTCGT
GTCCTCGAAA GCCGCGAACG GCTGCAACAG GTGTTGCAGA TCGCCGGCAA TGAAATGAGC
AGCCTGCATC AACAACTCTC CGGCGCCGGC CATGCGGTAC TGCTGACCGA CGCACGCGGG
GTGATCCTCA ACTGCGTCAC CGCCCCCGCC GAACGCAAGA TTTTCGAACG CGCCGGCCTG
TGGCTGGGCT CCGACTGGAG CGAGGCCTGC GAGGGCACCA ACGGGATCGG CACTTGCCTC
GTTGAACGTC AGGCCCTGAC GATTCATCAG GATGAACACT TTCGCGGCCG CCATACCGGC
CTGACCTGCT CGGCGAGCCC GGTGTTCGAC CCGCACGGCG AACTGCTGGC GGTGCTTGAT
GTTTCCTCGG CCCGGCCTGA CGTCTCGCGG CAGAGCCAGT TCCACACCAT GGCGCTGGTC
AATTTGTCGG CGAAGATGAT CGAGAGCTGC TATTTCCTGC GCTGTTTCGA TAACCAATGG
TTGCTGCGTT TCCATCTCCA GGCCGAGTCC GTCGGGCTGT TCAGCGAAGG GTTGCTGGCG
TTTGACGGGG AAGGGCGGAT CAGTGCGGTC AATCAGAGTG CCTTGAACCT GCTCGGCCAT
ATTCGCGGTG GTTTGCTGGG CAAACCGGTG GAGGCGTTTT TCGATTGTTC GCTGGATGAG
TTGCTCGGGC GCGCCAGTGC CAATGCCAGT GCCAGTTGGC CGTTGCGTAC TCGTGACGGA
CGGCATCTGT TTGCGGTGCT GCGTGGCGAA ACTCGCCGGC CGCTGCCGGT CGCGCCGGCT
CACGCGCCTG TGGAAGCGCC GCGTCTTGCA GGCATTTGCC TCGGTGATGC GACGTTGCAG
GCGGATTTCC GCAAGTCGCT GCGGGTATTC GAGCGCGACG TGCCGCTGCT GATCAACGGT
GAAACAGGCT CCGGCAAAGA AGCATTCGCC AAGGCTGTGC ACAACGCCAG TCAGCGCGCC
GGCAAAGCCT TCGTTGCCCT CAACTGCGCG GCGATTCCCG AAAGCCTGAT CGAGAGCGAA
CTGTTCGGCT ATCGCGGCGG CAGCTTCACC GGCGCGCGCA AGGACGGTAT GCGCGGCAAG
TTGCAGCAGG CCGATGGCGG CACGCTGTTC CTCGATGAAA TCGGCGACAT GCCGCTGGCT
CTGCAAACCC GTCTGCTGCG GGTGCTGGAA GACCGGCAAG TGGTGCCGAT TGGCGGCGAG
CCGGAAGCGG TCAACGTGCG GATCATCAGC GCCACCCACC GCAATCTGCT GGAACGGGTC
GGCGATGGCA GTTTCCGTGA AGACCTTTAC TACCGGCTCA ACGGGCTGGA AGTGGCGCTG
CCACCATTGC GCGAGCGCAG TGACAAATCG CAGCTGCTCG ATTTTCTGCT GGCCGAAGAG
GCGGGCGGGG AAACGATTCT GATCGAAGAA CCGGCGCGCC AGGCGTTGCT GCGGTTCAAC
TGGCCGGGCA ATGTGCGGCA GTTGCGCAAT GTGCTGCGCA CGCTGGCGGC GTTGTGCGAT
GAAGGGCGGA TCGGGCTGGA TGATCTGCCC GCGATGTTTC GGCAGGTTCA GCCACTGTTG
GTAAAAGCCG ATGAAGCGTC ATCCGCACAA CCGCTGGAAG ATGCCGAGCG ACTGGCGTTG
CTCAATGCGC TGGAACACTC GCGCTGGCAC ATGACCCTCA CGGCGCAGCA ACTGGGCGTC
AGCCGCAATA CGCTATATAG AAAGCTGCGC AAGCACGGGA TCGCCCGAAC CGCCTGA
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| Protein sequence | MHDNHLSRHA QQVLTVTQGK PHLHGPGADP SIARSWLRCL EDYHLDPALT MAPTVLEHGR
VLESRERLQQ VLQIAGNEMS SLHQQLSGAG HAVLLTDARG VILNCVTAPA ERKIFERAGL
WLGSDWSEAC EGTNGIGTCL VERQALTIHQ DEHFRGRHTG LTCSASPVFD PHGELLAVLD
VSSARPDVSR QSQFHTMALV NLSAKMIESC YFLRCFDNQW LLRFHLQAES VGLFSEGLLA
FDGEGRISAV NQSALNLLGH IRGGLLGKPV EAFFDCSLDE LLGRASANAS ASWPLRTRDG
RHLFAVLRGE TRRPLPVAPA HAPVEAPRLA GICLGDATLQ ADFRKSLRVF ERDVPLLING
ETGSGKEAFA KAVHNASQRA GKAFVALNCA AIPESLIESE LFGYRGGSFT GARKDGMRGK
LQQADGGTLF LDEIGDMPLA LQTRLLRVLE DRQVVPIGGE PEAVNVRIIS ATHRNLLERV
GDGSFREDLY YRLNGLEVAL PPLRERSDKS QLLDFLLAEE AGGETILIEE PARQALLRFN
WPGNVRQLRN VLRTLAALCD EGRIGLDDLP AMFRQVQPLL VKADEASSAQ PLEDAERLAL
LNALEHSRWH MTLTAQQLGV SRNTLYRKLR KHGIARTA
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