| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4987 |
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| Symbol | |
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| ID | 3714945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5616357 |
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| End bp | 5617706 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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| Protein accession | YP_350715 |
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| Protein GI | 77461208 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATTC ATATTCTGGG TATCTGCGGG ACTTTCATGG GCTCGATGGC GGTTCTGGCC
AAAGAGCTGG GCCATCACGT GACTGGCTCC GATGCCAACG TCTATCCGCC GATGAGCACC
CAGCTCGAAG CCCAGGGCAT TCAGTTGACC CAGGGCTACG ACCCGGCGCA GCTTGATCCG
GCACCGGATC TGGTGGTGAT CGGCAACGCC ATGTCCCGCG GCAATCCGGC AGTGGAATAT
GTGCTGAACA AAGGCCTGCC GTACGTTTCC GGCCCGCAAT GGCTGGCCGA CCATGTGCTG
CAAGGTCGCT GGGTGCTGGC GGTTGCCGGT ACGCACGGCA AGACCACCAC CAGCAGCATG
CTCGCCTGGG TACTGGAACA CGCCGGCATG AGCCCGGGCT TCCTGATCGG CGGCGTGCCG
CAGAACTTCT CGGTGTCGGC ACGTCTGGGT GGTACGCCGT TCTTCGTGAT CGAGGCTGAC
GAATACGACA GCGCGTTCTT CGACAAGCGA TCGAAGTTTG TCCACTACCG TCCGCGCACG
GCGATCCTCA ACAACCTTGA GTTCGATCAT GCCGACATCT TCCCTGATCT GCCAGCCATC
GAGCGGCAGT TCCACCACTT GGTGCGCACC ATCCCGAGCG AAGGCCTGGT GATTCACCCG
ACCACCGAAC CGGCCTTGCA GCGTGTGATC GAGATGGGCT GCTGGACCCC GGTGCAGACC
ACCGGTGCCG GCGGTCAGTG GCAGGTCAAG TTGCTGAAGG ACGACGGCTC GGCGTTTGAA
GTGATGTTCG AAGGCGTGTC CCAAGGCGTG GTCGAGTGGG AGTTGACCGG TCAGCACAAC
GTTGCCAACG CCCTGGCCAC TCTGGCCGCG GCGCGTCATG TCGGCGTTGT ACCGTCGATG
GGCATCGCCG GGTTGAGCGC GTTCAAGAGC GTGAAACGCC GGATGGAGAA AGTCGCGGAA
GTTCGGGGAA TCACCATCTA CGATGACTTC GCCCACCACC CGACCGCGAT TGCCACCACC
CTTGATGGCC TGCGCAAACG TATCGGCGAT GCGCCGCTGA TCGCGATCAT CGAGCCGCGC
TCCAACTCGA TGAAGCTCGG CGCCCACCGT GACGGTCTGC CGGACAGCGT GGTCGATGCC
GATCAAGTGA TCTGGTACGC CCCGGCCAAC CTCGGTTGGG ATCTGGCAGG CACCGCCGCG
TTGTGCACCG TGCCGTCGAT CGTCAGTGAT TCGCTGGAAG GCATCATTGA GCGCGTGAAG
AGCCAGGCTC AGCCCGGCAC TCACGTGGTG ATCATGAGCA ACGGCGGTTT CGGCGGCCTG
CACGGCAAAC TCGCCGAGGC GTTGAAATGA
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| Protein sequence | MHIHILGICG TFMGSMAVLA KELGHHVTGS DANVYPPMST QLEAQGIQLT QGYDPAQLDP
APDLVVIGNA MSRGNPAVEY VLNKGLPYVS GPQWLADHVL QGRWVLAVAG THGKTTTSSM
LAWVLEHAGM SPGFLIGGVP QNFSVSARLG GTPFFVIEAD EYDSAFFDKR SKFVHYRPRT
AILNNLEFDH ADIFPDLPAI ERQFHHLVRT IPSEGLVIHP TTEPALQRVI EMGCWTPVQT
TGAGGQWQVK LLKDDGSAFE VMFEGVSQGV VEWELTGQHN VANALATLAA ARHVGVVPSM
GIAGLSAFKS VKRRMEKVAE VRGITIYDDF AHHPTAIATT LDGLRKRIGD APLIAIIEPR
SNSMKLGAHR DGLPDSVVDA DQVIWYAPAN LGWDLAGTAA LCTVPSIVSD SLEGIIERVK
SQAQPGTHVV IMSNGGFGGL HGKLAEALK
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