| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4986 |
|---|
| Symbol | |
|---|
| ID | 3714944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5615725 |
|---|
| End bp | 5616360 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | aromatic acid decarboxylase |
|---|
| Protein accession | YP_350714 |
|---|
| Protein GI | 77461207 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.646675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA ACGGCCCAGA ACGCATCACA CTGGCGATGA CCGGCGCGTC CGGCGCCCAG
TACGGCTTGC GCCTGCTGGA TTGCCTGGTG CGCGAGGATC GCGAGGTGCA CTTCCTGATC
TCCAAGGCTG CGCAATTGGT GATGGCCACC GAGACCGACG TGTCGTTGCC GGCCAAGCCG
CAAATGATGC AGGCGTTCCT CACCGAATAC ACCGGCGCAG CCGCCGGGCA GATCCGCGTG
TACGGCAAGG AAGACTGGAT GTCGCCGGTG GCCTCGGGTT CCGGCGCTCC GGCCGCCATG
GTGGTGGTGC CGTGCTCGAC CGGCACCTTG TCGGCCATTG CCACCGGCGC CTGCAACAAC
CTGATCGAAC GGGCGGCGGA CGTGACGTTG AAGGAACGTC GCCAGTTGAT TCTGGTACCT
CGCGAAGCGC CGTATTCGAG CATTCATCTG GAACACATGC TCAAGTTGTC GAACATGGGC
GTGACCATCC TGCCGGCCTC ACCGGGTTTC TATCACCAAC CACAGACGAT TGATGACCTG
ATCGATTTCG TGGTGGCGCG GATTCTCAAT CTGCTGGGCA TTCCCCAGGA CATGCTGCCG
CGCTGGGGCG AACACCATCT GAGCAGCGAT GAATAA
|
|---|
| Protein sequence | MNNNGPERIT LAMTGASGAQ YGLRLLDCLV REDREVHFLI SKAAQLVMAT ETDVSLPAKP
QMMQAFLTEY TGAAAGQIRV YGKEDWMSPV ASGSGAPAAM VVVPCSTGTL SAIATGACNN
LIERAADVTL KERRQLILVP REAPYSSIHL EHMLKLSNMG VTILPASPGF YHQPQTIDDL
IDFVVARILN LLGIPQDMLP RWGEHHLSSD E
|
|---|
| |