Gene Pfl01_4983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4983 
Symbol 
ID3714941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5613005 
End bp5614732 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350711 
Protein GI77461204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.291511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCAT TCGCCCCTCT TGCTCCCCTT GCCTTGACCC TGTTGCTGGC CGCGTGTGGC 
GACGGCGAAT CGCTGTTGCC GCCGGATGCG CGCCTGCCCG ACGGCGGCCG CTATCGCGGT
GAACTGGTCG ATGGCTTGCT GCAAGGTCAG GGCCGGGTCG ACTACCCCAA CGGCAGCTGG
TACGCCGGGG CGTTCGACAA GGGGCAATGG CATGGCCAGG GCGAATGGCA TGGCAGCAAT
GGCGAGGTCT ATCGCGGCAA CTTCCAGCAA GGGCTGTTCG ACGGCCAGGG CACATTGACC
ACCACGGCAG GCAGCTACAC CGGCGGTTTC AAGCAGGGCC GGCGCGAAGG CGAAGGCACC
CTCAAAGAAA ACGCGATGAC CTATCGCGGC GAGTTCAAGG CCGACCAGTA TTCCGGTCTC
GGTCGCCTCG AGCTGGATGA CGGCAGCTCT TACCAGGGCC AGTTCGCCCA CGGCAAACCC
AACGGCGAAG GCCAGCGCGG CGATGCCAGC GGCAATCAGT TCACCGGCCA CTTCGTCAAT
GGCCAGCTCG AAGGCAACGG CACCTTCAAC AGTGCCGACG GCGACATCTA CGTCGGCGGC
TTCAAGAACA ATCAACTGCA CGGCAAAGGC CGCTACGAAA ACGCCGACGG CGATGTGTGG
CTCGGGCAGT TCAAGGAAGG CGCGCTGACC GGCAAGGGCG AACTGATCGG CGCCGACGGC
AGCCACTACA TCGGCTACTT CAACGACTGG CGCTTCAGCG GTCAGGGTCG CCTGAACCTG
TCCGATGGCA GTTTCTACGT CGGTGGATTC GACAGCGACA GTTATTCCGG ACGCGGCACC
CTGGTGCTCA CCGATGGCAG CGTGCTCAGC GGCACCTGGA TCAACGGCCA GCGGGTACGC
GATGCCGACG GCAAGTTGCT GCCGGACACC CTCGAACTCG GCCTGCTGGC CCAAGGTCGC
CTGCTCGATG AAGCGCTGGC CAATGTGCCG GCCTCGACCC CGGCAGTGGA GCTGTACACC
CTGACCCTCG GCGGCGATGG CAAGCAGAGC GTGTTCCTGC GCGAATCCGA TTACGTCGCG
AACATGCTCA CCAGCCGTTT CGGTGCCTTT GGCCAGATTC GCCTGGTCAA CCACCGCGAC
CACCTCGGCG ACCGGCCGAT GGCCACTCGT GAGAACCTGC GCCGCGCAGC CCTGACCCTG
GCCGAACGCA GTGGCCCGGA AGATCTGGTC TTCATTTACC TGACCAGCCA CGGCACCGCC
GAGCACGAAC TGGTGCTCGA CCAGCCGCGC ATGGAGCTGG CCGACCTGCC CGCCGACGAA
CTCGCCGCCG TGCTCGCGCC GCTGAAGAAT CGCGACAAGA TCATTGTCAT TTCCTCGTGC
TATTCCGGGG GCTTCATTCC GGCGTTGAAG GATGAACGCA CTCTGATCAT GACCGCCTCG
CGCGCCGATC GAGTGTCGTT CGGCTGCTCC GAGGAGGCCA ACTTCACCTA CTTCGGCGAC
GCCCTGTTTG CCCAGGCGCT GAACCAGACC GACGACCTGG AACAAGCCTT CAAACTGGCC
AAGGCCACCG TCGCCGAGCG CGAACTGGCG GACAATTTCG AAGCCTCTGA ACCGCAGATC
TGGGCGCCGA AAACCGTGCT GGCGCACTGG CAACTGCTGC GTAAACAGCA AGCGAGAAAA
GCCTTGCAAA GTGCTGCGTT GAACGACGGA GCGACAAAGA GCAACTAA
 
Protein sequence
MRSFAPLAPL ALTLLLAACG DGESLLPPDA RLPDGGRYRG ELVDGLLQGQ GRVDYPNGSW 
YAGAFDKGQW HGQGEWHGSN GEVYRGNFQQ GLFDGQGTLT TTAGSYTGGF KQGRREGEGT
LKENAMTYRG EFKADQYSGL GRLELDDGSS YQGQFAHGKP NGEGQRGDAS GNQFTGHFVN
GQLEGNGTFN SADGDIYVGG FKNNQLHGKG RYENADGDVW LGQFKEGALT GKGELIGADG
SHYIGYFNDW RFSGQGRLNL SDGSFYVGGF DSDSYSGRGT LVLTDGSVLS GTWINGQRVR
DADGKLLPDT LELGLLAQGR LLDEALANVP ASTPAVELYT LTLGGDGKQS VFLRESDYVA
NMLTSRFGAF GQIRLVNHRD HLGDRPMATR ENLRRAALTL AERSGPEDLV FIYLTSHGTA
EHELVLDQPR MELADLPADE LAAVLAPLKN RDKIIVISSC YSGGFIPALK DERTLIMTAS
RADRVSFGCS EEANFTYFGD ALFAQALNQT DDLEQAFKLA KATVAERELA DNFEASEPQI
WAPKTVLAHW QLLRKQQARK ALQSAALNDG ATKSN