Gene Pfl01_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4980 
Symbol 
ID3714938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5611167 
End bp5611883 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID 
ProductLrgB-like protein 
Protein accessionYP_350708 
Protein GI77461201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.235644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTCG ACTGGCAAGG TGCCTGGGCG TCGGTGATTC ACCATCCCCT GTTCGGCATC 
GGCATCACTC TGGGTGCCTA TCAACTGGTG CTGGCTGCGT TCGAGAAAAC CCGCTGGATC
TTTCTGCAAC CGGTGCTGGT CTCGATGCTG TTGGTGATCG GCGTGCTGGT CGGCTGCGGC
CTGACCTACG CCGAGTACCG CAAGAGCACC GAGATCCTCA GTATCTTGCT CGGGCCGGCA
ACCGTGGCGC TGGCCGTGCC GCTGTACCTG AACCTGCGAC GCATCCGCCA ATTGTTCTGG
CCGATTTTTA CTACGCTGGT GATAGGCGGC GTGGTCGCCA CGGGCATGGG CGTGGCGCTG
GGCTGGTGGT TCGGGGCCGA TCACATGATC CTGATGACCA TGGCGCCCAA GTCGGTCACC
TCGCCGATCG CCATGCTGGT GGCCGAGCAG ATCGGTGGCG TCGCGGCACT GGCGGCGGTG
TTCGTGTTGA TCACCGGGGT GATCGGCGCG ATCTTCGGCC CGGCGCTGCT GACCCGCCTC
GGTGTGCACA GCCCCGAGGC GCGCGGCATG GCGCTGGGCA TGACGGCGCA TGCGGTCGGC
ACGTCGGTGG CGCTGCAGGA AAGCGATGAG TGCGGCGCCT TTGCGGCGCT GGCGATGAGT
TTGATGGGCG TGGCCACGGC GGTGTTCCTG CCGTTGGCGG TGTCGATGGT GGTGTAA
 
Protein sequence
MLFDWQGAWA SVIHHPLFGI GITLGAYQLV LAAFEKTRWI FLQPVLVSML LVIGVLVGCG 
LTYAEYRKST EILSILLGPA TVALAVPLYL NLRRIRQLFW PIFTTLVIGG VVATGMGVAL
GWWFGADHMI LMTMAPKSVT SPIAMLVAEQ IGGVAALAAV FVLITGVIGA IFGPALLTRL
GVHSPEARGM ALGMTAHAVG TSVALQESDE CGAFAALAMS LMGVATAVFL PLAVSMVV