Gene Pfl01_4952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4952 
Symbol 
ID3714035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5579935 
End bp5580429 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID 
Productputative metalloprotease 
Protein accessionYP_350680 
Protein GI77461173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.350599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC TTGACCTGCA AATCGCGACC GAAGCGCCTG CGCCGACCGA AGCCGAGTTC 
CGCCAATGGT GCGAACTGGC CCTGCGCCAG CGCACAGCCG ACTCGGAAAT GACCATTCGT
CTGGTCGATG AGGACGAAGG CCGCGAGCTG AATCACACCT GGCGGCACAA GGATTACGCG
ACCAACGTCC TGTCCTTTCC CGCCGAAGTG CCCGACGAGT TCCTAGACAT CCCGCTGCTG
GGAGATCTGG TGATCTGCGT GGCCGTGGTT GAGCGTGAGG CCACCGAACA GGGCAAGGAA
CTAAAGGCCC ACTGGGCACA TCTGGTCATT CACGGCTGCT TGCATCTGCT TGGTTACGAC
CATATAGATG ACGAGGAAGC CGAGGAAATG GAAGCACTGG AACGCGAGTT GCTTGCCGAA
TTGGGTTATC CCGATCCGTA CGCGGACGAC GAAACCGAAA CATCCCCTAC TGTTACAACA
AAGGATTCAG AGTAA
 
Protein sequence
MLELDLQIAT EAPAPTEAEF RQWCELALRQ RTADSEMTIR LVDEDEGREL NHTWRHKDYA 
TNVLSFPAEV PDEFLDIPLL GDLVICVAVV EREATEQGKE LKAHWAHLVI HGCLHLLGYD
HIDDEEAEEM EALERELLAE LGYPDPYADD ETETSPTVTT KDSE