Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4948 |
Symbol | |
ID | 3714031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5576371 |
End bp | 5576925 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | Sel1 repeat-containing protein |
Protein accession | YP_350676 |
Protein GI | 77461169 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.962981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA CCGGCCGCAC CCTTGCCTTG GGCTGCCTGT TGCTCCTTCA GCCGCTGCTC GCGAATGCAC AAGCAGGCGG CAACTCGTTG TTGATCCCGG CGATGGGTCG CTGCACCCTC AATACTCAGC CGCAAGATGT CACGCAGGCC CTCGCCGCCT GCCAAAAGGC AGCGGATGAA GGGGATGCGC AAGCGCAATA CGAGTTGGGT GAGTTCTACT ACGACGGCAA GAACGCGCCG CGCGACCTCA ATCAAGCCCT GAGCTATTTC GAAAAGGCCT CGCTGCAAGG CCATGCCCAG GCGCAATTCA AGCTCGGCAC CATGTTCTTC CACGGCGAAG GCGTGCAAGC CAACAACATT CAGGCGTACA TCGTGCTGAA GATGGCGGCG GTCAACGGCG CCGAAGACGC GCTCGACACC GCCGACGAAG TGTCCGAAAA GATGTCCCGC GAAGACCTGG AAACCGCGAC CCAGGTGCTC GGGCAAATTT TCCGTAAATA CCTGATGGAA CTGCAGAGCG CCGACGGGCG TACGCCGTTC TCGCCCCTGC CCTGA
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Protein sequence | MNRTGRTLAL GCLLLLQPLL ANAQAGGNSL LIPAMGRCTL NTQPQDVTQA LAACQKAADE GDAQAQYELG EFYYDGKNAP RDLNQALSYF EKASLQGHAQ AQFKLGTMFF HGEGVQANNI QAYIVLKMAA VNGAEDALDT ADEVSEKMSR EDLETATQVL GQIFRKYLME LQSADGRTPF SPLP
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