| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4948 |
|---|
| Symbol | |
|---|
| ID | 3714031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5576371 |
|---|
| End bp | 5576925 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | Sel1 repeat-containing protein |
|---|
| Protein accession | YP_350676 |
|---|
| Protein GI | 77461169 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.962981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA CCGGCCGCAC CCTTGCCTTG GGCTGCCTGT TGCTCCTTCA GCCGCTGCTC
GCGAATGCAC AAGCAGGCGG CAACTCGTTG TTGATCCCGG CGATGGGTCG CTGCACCCTC
AATACTCAGC CGCAAGATGT CACGCAGGCC CTCGCCGCCT GCCAAAAGGC AGCGGATGAA
GGGGATGCGC AAGCGCAATA CGAGTTGGGT GAGTTCTACT ACGACGGCAA GAACGCGCCG
CGCGACCTCA ATCAAGCCCT GAGCTATTTC GAAAAGGCCT CGCTGCAAGG CCATGCCCAG
GCGCAATTCA AGCTCGGCAC CATGTTCTTC CACGGCGAAG GCGTGCAAGC CAACAACATT
CAGGCGTACA TCGTGCTGAA GATGGCGGCG GTCAACGGCG CCGAAGACGC GCTCGACACC
GCCGACGAAG TGTCCGAAAA GATGTCCCGC GAAGACCTGG AAACCGCGAC CCAGGTGCTC
GGGCAAATTT TCCGTAAATA CCTGATGGAA CTGCAGAGCG CCGACGGGCG TACGCCGTTC
TCGCCCCTGC CCTGA
|
|---|
| Protein sequence | MNRTGRTLAL GCLLLLQPLL ANAQAGGNSL LIPAMGRCTL NTQPQDVTQA LAACQKAADE
GDAQAQYELG EFYYDGKNAP RDLNQALSYF EKASLQGHAQ AQFKLGTMFF HGEGVQANNI
QAYIVLKMAA VNGAEDALDT ADEVSEKMSR EDLETATQVL GQIFRKYLME LQSADGRTPF
SPLP
|
|---|
| |