Gene Pfl01_4947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4947 
SymbolhemL 
ID3714030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5574861 
End bp5576144 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content64% 
IMG OID 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_350675 
Protein GI77461168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTT CCGAAACCCT GTTTGCCAAC GCCCAGAAAC ACATTCCCGG TGGCGTGAAC 
TCGCCGGTAC GCGCGTTCAA GAGCGTTGGC GGCACGCCGC TGTTCTTCAA GCACGCCGAA
GGCGCCTACG TCACTGACGA AGACGACAAG CGTTATGTGG ATTACGTCGG CTCGTGGGGC
CCGATGATCC TCGGCCACAG CCACCCGGAC GTGCTGGACG CGGTGCGCAA CCAGTTGCAG
CACGGCCTGT CCTACGGCGC GCCGACCGCG ATGGAAACCG AGATGGCCGA CCTGGTCTGC
TCGCTGGTGC CGTCGCTGGA GATGGTGCGC ATGGTCAGCT CCGGCACCGA AGCGACCATG
AGTGCAATCC GTCTGGCCCG TGGCTTCACC GGCCGCGACA GCATCATCAA GTTCGAAGGC
TGCTACCACG GTCACTCCGA CAGCCTGCTG GTCAAGGCCG GTTCCGGTGC ACTGACCCAA
GGCGTACCAA GCTCTGCCGG CGTACCCGCA GCGTTCGCCA AACACACCCT GACCCTGCCG
TTCAACGACA TCGACGCCGT TGAAAAAATG CTCGCCGAAG TCGGCCAGGA CGTGGCGTGC
ATCATCGTCG AGCCCGTGGC CGGCAACATG AACTGCGTAC CGCCGGCACC GGGTTTCCTC
GAAGGCCTGC GCAGCCTGTG CGACAAGCAC GGCGTGGTGC TGATTTTCGA CGAAGTGATG
ACTGGTTTCC GCGTCGCCCT CGGCGGCGCC CAGGCTTACT ACGGCGTAAC CCCGGACCTG
ACCACCTTCG GCAAGATCAT CGGCGGCGGC ATGCCGGTCG GTTGCTTCGG CGGCAAGCGC
TTGATCATGG AGCGCATCGC GCCGTTGGGC CCGGTCTATC AGGCGGGCAC CTTGTCGGGT
AACCCGCTGG CGATGGCTGC CGGCCTGACC ACCCTGCGTC TGATCAGCCG TCCGGGCTTC
CACGCCGAGC TGACCGACTA CACCACGCGC CTGCTCGACG GCCTGCAACA GCGCGCCGAT
GCCGCCGGCA TTCCGTTCGT GACCACCCAG GCGGGCGGCA TGTTCGGTCT GTACTTCAGT
GGTGCCGACG ACATTGTTAC TTTTGAAGAC GTGATGGCCA GCGATGCGGC GCTGTTCGGT
CGCTTCTTCC ACCTGATGCT GGAAGGTGGC GTATATCTCG CACCGAGCGC TTTCGAAGCC
GGTTTCACCT CGATCGCCCA TGGCGAAGCC GAGCTGAAAC TGACCCTCGA CGCCGCCGAA
CGCGCCTTCG CCAAGTTGAA GTAA
 
Protein sequence
MSRSETLFAN AQKHIPGGVN SPVRAFKSVG GTPLFFKHAE GAYVTDEDDK RYVDYVGSWG 
PMILGHSHPD VLDAVRNQLQ HGLSYGAPTA METEMADLVC SLVPSLEMVR MVSSGTEATM
SAIRLARGFT GRDSIIKFEG CYHGHSDSLL VKAGSGALTQ GVPSSAGVPA AFAKHTLTLP
FNDIDAVEKM LAEVGQDVAC IIVEPVAGNM NCVPPAPGFL EGLRSLCDKH GVVLIFDEVM
TGFRVALGGA QAYYGVTPDL TTFGKIIGGG MPVGCFGGKR LIMERIAPLG PVYQAGTLSG
NPLAMAAGLT TLRLISRPGF HAELTDYTTR LLDGLQQRAD AAGIPFVTTQ AGGMFGLYFS
GADDIVTFED VMASDAALFG RFFHLMLEGG VYLAPSAFEA GFTSIAHGEA ELKLTLDAAE
RAFAKLK