Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4947 |
Symbol | hemL |
ID | 3714030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5574861 |
End bp | 5576144 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | glutamate-1-semialdehyde aminotransferase |
Protein accession | YP_350675 |
Protein GI | 77461168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTT CCGAAACCCT GTTTGCCAAC GCCCAGAAAC ACATTCCCGG TGGCGTGAAC TCGCCGGTAC GCGCGTTCAA GAGCGTTGGC GGCACGCCGC TGTTCTTCAA GCACGCCGAA GGCGCCTACG TCACTGACGA AGACGACAAG CGTTATGTGG ATTACGTCGG CTCGTGGGGC CCGATGATCC TCGGCCACAG CCACCCGGAC GTGCTGGACG CGGTGCGCAA CCAGTTGCAG CACGGCCTGT CCTACGGCGC GCCGACCGCG ATGGAAACCG AGATGGCCGA CCTGGTCTGC TCGCTGGTGC CGTCGCTGGA GATGGTGCGC ATGGTCAGCT CCGGCACCGA AGCGACCATG AGTGCAATCC GTCTGGCCCG TGGCTTCACC GGCCGCGACA GCATCATCAA GTTCGAAGGC TGCTACCACG GTCACTCCGA CAGCCTGCTG GTCAAGGCCG GTTCCGGTGC ACTGACCCAA GGCGTACCAA GCTCTGCCGG CGTACCCGCA GCGTTCGCCA AACACACCCT GACCCTGCCG TTCAACGACA TCGACGCCGT TGAAAAAATG CTCGCCGAAG TCGGCCAGGA CGTGGCGTGC ATCATCGTCG AGCCCGTGGC CGGCAACATG AACTGCGTAC CGCCGGCACC GGGTTTCCTC GAAGGCCTGC GCAGCCTGTG CGACAAGCAC GGCGTGGTGC TGATTTTCGA CGAAGTGATG ACTGGTTTCC GCGTCGCCCT CGGCGGCGCC CAGGCTTACT ACGGCGTAAC CCCGGACCTG ACCACCTTCG GCAAGATCAT CGGCGGCGGC ATGCCGGTCG GTTGCTTCGG CGGCAAGCGC TTGATCATGG AGCGCATCGC GCCGTTGGGC CCGGTCTATC AGGCGGGCAC CTTGTCGGGT AACCCGCTGG CGATGGCTGC CGGCCTGACC ACCCTGCGTC TGATCAGCCG TCCGGGCTTC CACGCCGAGC TGACCGACTA CACCACGCGC CTGCTCGACG GCCTGCAACA GCGCGCCGAT GCCGCCGGCA TTCCGTTCGT GACCACCCAG GCGGGCGGCA TGTTCGGTCT GTACTTCAGT GGTGCCGACG ACATTGTTAC TTTTGAAGAC GTGATGGCCA GCGATGCGGC GCTGTTCGGT CGCTTCTTCC ACCTGATGCT GGAAGGTGGC GTATATCTCG CACCGAGCGC TTTCGAAGCC GGTTTCACCT CGATCGCCCA TGGCGAAGCC GAGCTGAAAC TGACCCTCGA CGCCGCCGAA CGCGCCTTCG CCAAGTTGAA GTAA
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Protein sequence | MSRSETLFAN AQKHIPGGVN SPVRAFKSVG GTPLFFKHAE GAYVTDEDDK RYVDYVGSWG PMILGHSHPD VLDAVRNQLQ HGLSYGAPTA METEMADLVC SLVPSLEMVR MVSSGTEATM SAIRLARGFT GRDSIIKFEG CYHGHSDSLL VKAGSGALTQ GVPSSAGVPA AFAKHTLTLP FNDIDAVEKM LAEVGQDVAC IIVEPVAGNM NCVPPAPGFL EGLRSLCDKH GVVLIFDEVM TGFRVALGGA QAYYGVTPDL TTFGKIIGGG MPVGCFGGKR LIMERIAPLG PVYQAGTLSG NPLAMAAGLT TLRLISRPGF HAELTDYTTR LLDGLQQRAD AAGIPFVTTQ AGGMFGLYFS GADDIVTFED VMASDAALFG RFFHLMLEGG VYLAPSAFEA GFTSIAHGEA ELKLTLDAAE RAFAKLK
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