Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4941 |
Symbol | |
ID | 3714024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5566740 |
End bp | 5567375 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | ribosomal large subunit pseudouridine synthase E |
Protein accession | YP_350669 |
Protein GI | 77461162 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTC CCCAACGTCC GCCTTCCCGC CGCCCCGGCG CGAAGCCAGC TTCTTCAGCC CCGCGCCGTG TCGCCAAGGC ACCGCCCGCT GAGCCGAAGC TGATCCTGTT CAACAAACCG TTCGATGTGC TGACGCAATT CAGCGACGGT GAAGGGCGGG CGACGCTCAA GGATTACATC GACATTCCGG GTATTTACCC GGCCGGACGG CTGGACCGCG ACAGCGAGGG TTTGCTGCTG CTGACCAACG ACGGTCAGTT GCAGGCGCGG ATCGCCGACC CCAGGCACAA ACTGGCGAAA ACCTATTGGG TGCAGGTCGA AGGCCTGCCT ACGGCCGAGC AGTTGCAGCG TCTGCGTGAC GGCGTTGAAT TGAATGACGG CATGACCTTG CCCGCGCGAG CGAGGCAACT GGACGAGCCC GAACTGTGGC CGCGCAATCC ACCGGTGCGC TTTCGCGCAA CGATTCCGAC AACCTGGCTG GAACTGGTGA TTCGCGAAGG GCGCAACCGC CAGGTGCGGC GGATGACGGC GGCGGTCGGG CTGCCGACGT TGCGGCTGGT GCGGGTCAGG ATTGGTGACT GGACGATCGA AGGGCTCGAT CAGGGCCAGT GGAAAGAAGT GCCGGCGCGC TTATAA
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Protein sequence | MSRPQRPPSR RPGAKPASSA PRRVAKAPPA EPKLILFNKP FDVLTQFSDG EGRATLKDYI DIPGIYPAGR LDRDSEGLLL LTNDGQLQAR IADPRHKLAK TYWVQVEGLP TAEQLQRLRD GVELNDGMTL PARARQLDEP ELWPRNPPVR FRATIPTTWL ELVIREGRNR QVRRMTAAVG LPTLRLVRVR IGDWTIEGLD QGQWKEVPAR L
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