Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4931 |
Symbol | |
ID | 3714053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5555168 |
End bp | 5556145 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | putative sulfonate/nitrate transport system substrate-binding protein |
Protein accession | YP_350659 |
Protein GI | 77461152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.658628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGT CCTTGTTTAC CCGTCTTGCA TGTCCTCTGG CGATTTCCGC CCTTTCCGTC ACCGCCGCCC AGGCCGGCAC CTTGTCGATT GGCCACACCA CGTGGGTCGG TTACGGCACC CTGTATCTGG CTCAGGATCT GGGCTATTTC AAGGAAAACG GTCTGACCGT CGAATTGCCG GTGGTCGAAG AAGCGTCGAT GTACATGGCC GCCCAGGCAT CCGGGCAATT GTCCGGCTCG GCCTCGACCA TCGACGAAGT GCTCAAGTAC CGCCCGCAGT TCTGCTTCAA GGCCGTGGCC GCGCTGGATG ACAGCCATGG CGGCGACGGT GTGCTGGTCG GCAAGAACGT GAAGAGCCTG CAAGAACTCA AGGGCCAGGC CGTGGCCGTC AACGAAGGCT CGACCTCGCA GTTCTGGCTC TCGTACCTGC TGAAAAAGAA CGGCATGAGG ATGAGCGACA TCACCGTGCA GAACATGACC GCTGACGATG CTGCCACCGC GTTCATCGCC GGTCGTGTGC CGGCCGCCGT GACTTGGGAG CCGCATCTGT CGATGGTGCG CGACAGGCAG CAGGGCAAGG TGCTGATCGA CAGTAGCAGT ACGCCGGGGG TGATCGTCGA TGTGGTGGCG CTCAATTGCA CGGTGATCGA GAAGCAGCCG GAAGACGTCA AGGCGCTGGT CGCCGGTCTC TACAAAGCGG TGCAGTTCAC CAAGGACCAT CCACAGAAAG CCTACGAAAT CATGGCCAAG GGTGTCGGCG GTTACCTGTC CGATCCAAAG GAACTGGCCG CCGCTGCGCA GGGCGTGCGC TTCTACGATC AGGCCATGAG CGAAAAACTC CTTGGCTCGC CGGGCAAGCC GGGTGACAGC GCACCGCTGA TCAAACTGGC CAACGAAACC GCCAGCGAAT TGCAGGGCAA GCCCTACAAC GTCAGCAACG ACGATCTGGT GGATAACCGT TTCGTCAGCC CGCTCTAG
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Protein sequence | MNKSLFTRLA CPLAISALSV TAAQAGTLSI GHTTWVGYGT LYLAQDLGYF KENGLTVELP VVEEASMYMA AQASGQLSGS ASTIDEVLKY RPQFCFKAVA ALDDSHGGDG VLVGKNVKSL QELKGQAVAV NEGSTSQFWL SYLLKKNGMR MSDITVQNMT ADDAATAFIA GRVPAAVTWE PHLSMVRDRQ QGKVLIDSSS TPGVIVDVVA LNCTVIEKQP EDVKALVAGL YKAVQFTKDH PQKAYEIMAK GVGGYLSDPK ELAAAAQGVR FYDQAMSEKL LGSPGKPGDS APLIKLANET ASELQGKPYN VSNDDLVDNR FVSPL
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