Gene Pfl01_4931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4931 
Symbol 
ID3714053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5555168 
End bp5556145 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content61% 
IMG OID 
Productputative sulfonate/nitrate transport system substrate-binding protein 
Protein accessionYP_350659 
Protein GI77461152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.658628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGT CCTTGTTTAC CCGTCTTGCA TGTCCTCTGG CGATTTCCGC CCTTTCCGTC 
ACCGCCGCCC AGGCCGGCAC CTTGTCGATT GGCCACACCA CGTGGGTCGG TTACGGCACC
CTGTATCTGG CTCAGGATCT GGGCTATTTC AAGGAAAACG GTCTGACCGT CGAATTGCCG
GTGGTCGAAG AAGCGTCGAT GTACATGGCC GCCCAGGCAT CCGGGCAATT GTCCGGCTCG
GCCTCGACCA TCGACGAAGT GCTCAAGTAC CGCCCGCAGT TCTGCTTCAA GGCCGTGGCC
GCGCTGGATG ACAGCCATGG CGGCGACGGT GTGCTGGTCG GCAAGAACGT GAAGAGCCTG
CAAGAACTCA AGGGCCAGGC CGTGGCCGTC AACGAAGGCT CGACCTCGCA GTTCTGGCTC
TCGTACCTGC TGAAAAAGAA CGGCATGAGG ATGAGCGACA TCACCGTGCA GAACATGACC
GCTGACGATG CTGCCACCGC GTTCATCGCC GGTCGTGTGC CGGCCGCCGT GACTTGGGAG
CCGCATCTGT CGATGGTGCG CGACAGGCAG CAGGGCAAGG TGCTGATCGA CAGTAGCAGT
ACGCCGGGGG TGATCGTCGA TGTGGTGGCG CTCAATTGCA CGGTGATCGA GAAGCAGCCG
GAAGACGTCA AGGCGCTGGT CGCCGGTCTC TACAAAGCGG TGCAGTTCAC CAAGGACCAT
CCACAGAAAG CCTACGAAAT CATGGCCAAG GGTGTCGGCG GTTACCTGTC CGATCCAAAG
GAACTGGCCG CCGCTGCGCA GGGCGTGCGC TTCTACGATC AGGCCATGAG CGAAAAACTC
CTTGGCTCGC CGGGCAAGCC GGGTGACAGC GCACCGCTGA TCAAACTGGC CAACGAAACC
GCCAGCGAAT TGCAGGGCAA GCCCTACAAC GTCAGCAACG ACGATCTGGT GGATAACCGT
TTCGTCAGCC CGCTCTAG
 
Protein sequence
MNKSLFTRLA CPLAISALSV TAAQAGTLSI GHTTWVGYGT LYLAQDLGYF KENGLTVELP 
VVEEASMYMA AQASGQLSGS ASTIDEVLKY RPQFCFKAVA ALDDSHGGDG VLVGKNVKSL
QELKGQAVAV NEGSTSQFWL SYLLKKNGMR MSDITVQNMT ADDAATAFIA GRVPAAVTWE
PHLSMVRDRQ QGKVLIDSSS TPGVIVDVVA LNCTVIEKQP EDVKALVAGL YKAVQFTKDH
PQKAYEIMAK GVGGYLSDPK ELAAAAQGVR FYDQAMSEKL LGSPGKPGDS APLIKLANET
ASELQGKPYN VSNDDLVDNR FVSPL