Gene Pfl01_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4928 
Symbol 
ID3714050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5552400 
End bp5553527 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content63% 
IMG OID 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_350656 
Protein GI77461149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCG GGTATGCTCG GGACCACTTC CGTATCGCTA TAAGCCGAGC CATGACCCGT 
CTACTGCGCT ACATCCTGTT GCCCGTACTG TTCGTCCTCG CCCTGATCGG CACGCTGATC
TACAGCCTGA CCTGGCGCCC CGACGCCCGG GAAACCCTGC CGGTCAGTTG CACCGGGCAA
CCGCCGATGC TGGTCCCCGG CCAGGCCCTG AAAGTCATGA CTTGGAACGT GCAATACCTG
GCCGGCAAGC GCTACGTGTT CTGGAATGAC CTGGCGCAAG GCGACGACGA AGCCCCGACT
CCGGAAGACA TGGCGTTCAG CCTCGATGAA GTGGCGCGGG TGATCCGCGA CGAACAGCCC
GACGTGGTGC TGTTGCAGGA ACTGGATGAC GGCGCCAAGG CCAGCGACTA TCAGAACCAG
CTCAAGCTGT TGCAGGAACG CCTCACCGAC CTCTACCCGT GCAGTGCCCA CGCCTTCGAC
TGGAAGGCCG ATTTCGTCCC GGATCCGCAC ATCTTCGGCA GCGTCGGCCG GCAACTCGCC
ACCCTCAGCC GCTACCGCAT CGAACACGCC GAACGCCTGC AATTGCCGGT GCAGCCGGCG
AATTTCATCA GCCGTCAGTT CCAGCCGAAA GATGCCCTGC TCGCCACCAC CCTGCCGCTC
AGCGATGGCG GGCAACTGGT GGTGTTCAAC ACCCATCTGG ATCGCGCCAC CCAACCGGAC
GACACCTTGC AGGCGCAGGT GACAGCGGTG GCCAAGGTTC TCGACAAACA CGAAAGCCAC
GGCACGCCGT GGCTGATCGG GGGGGACTTC AATCTGTTAC CGCTCGGCCA GTACCGGCGC
CTGCCCACCG AGCAGCGCAC GCCGTACTCC GCCGACAGTG CGCTGCATGT GCTGTGGGAC
AAGTACCCGA TGATCCCGAC CAACAACGAA GCCAGCGGCA TCGACCGCGC CAAGTGGCTG
ACCCATTACC CCAACGACCC CGGCCTCAAC GGCCCGGACC GCACGGTCGA CTATCTGTTC
TACAGCCCGA AGATCAAACG GGTCGAAGCC ACGGTGCGGC AGGACGATAC CTTGCGCATT
TCCGATCATC TGCCGGTGAT TGCCAAGTTC CTCCTGCCGC CCAACTGA
 
Protein sequence
MGLGYARDHF RIAISRAMTR LLRYILLPVL FVLALIGTLI YSLTWRPDAR ETLPVSCTGQ 
PPMLVPGQAL KVMTWNVQYL AGKRYVFWND LAQGDDEAPT PEDMAFSLDE VARVIRDEQP
DVVLLQELDD GAKASDYQNQ LKLLQERLTD LYPCSAHAFD WKADFVPDPH IFGSVGRQLA
TLSRYRIEHA ERLQLPVQPA NFISRQFQPK DALLATTLPL SDGGQLVVFN THLDRATQPD
DTLQAQVTAV AKVLDKHESH GTPWLIGGDF NLLPLGQYRR LPTEQRTPYS ADSALHVLWD
KYPMIPTNNE ASGIDRAKWL THYPNDPGLN GPDRTVDYLF YSPKIKRVEA TVRQDDTLRI
SDHLPVIAKF LLPPN