Gene Pfl01_4897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4897 
Symbol 
ID3714254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5520873 
End bp5522168 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content64% 
IMG OID 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_350625 
Protein GI77461118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.419904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA GGCTGTTTCA ACTCAAGGCA CACAACACCA ACGTGCGGAC CGAAATTCTG 
GCGGGCGTCA CGACCTTCCT GGCCATGGCC TACATTCTGT TCGTCAACCC GAGCATCCTC
GGCGAAACCG GCATGGACAA AGGCGCGGTG TTCGTCGCCA CGTGCCTTGC GGCTGCCATC
GGCTCCACGG TGATGGGCCT GATCGCCAAC TACCCGATCG CCCTCGCGCC GGGCATGGGC
CTGAACGCCT TCTTCACCTA CACCGTCGTG CTGCACATGG GCCACACCTG GCAAGTGGCG
CTGGGCGCGG TGTTCATTTC GGCGGTGTGC TTCTTCCTGC TGTCGATCTT CCGCATCCGT
GAGTGGATCA TCAACAGCAT CCCGCTGCCG CTGCGCTCGG CAATTGCCGC CGGTATCGGC
CTGTTCCTGG CGCTGATCGC CCTGCACAAC GCCGGCATCG TGGTCAGCAA CCCGGCGACC
ATGGTCGGCC TCGGTGACCT GAAACAACCG GCTCCGATCC TCGCCACCCT CGGTTTCGCC
CTGATCGTTG CCCTTGAAGC CCTGAAAGTG CGCGGCGCGG TGCTGATCGG CATTCTGGCG
GTGACCATCG TTTCCATCGT GATGGGCTTC ACCCCGTTCG GCGGCGTGAC GTCGATGCCG
CCTTCGCTGG CCCCGACCTT CCTGCAACTG GACATCAAGG GCGCTCTGGA CATCGGTCTG
GTCAGCGTGA TTTTCGCCTT CCTGTTCGTC GACCTGTTCG ACAACTCCGG CACCCTGATC
GGCGTCGCCA AGCGCGCAGG CCTGATGGGC AAGGACGGCC ACATGCCGAA AATGGGCCGT
GCGCTGATCG CTGACAGCAC CGCGGCAATG GCCGGTTCGC TGCTGGGCAC CTCGACCACC
ACCAGCTACA TCGAATCCGC TGCGGGCGTG AGTGCCGGCG GCCGCACCGG CCTGACCGCC
ATCGTCGTCG CAATCCTGTT CCTGCTGGCG CTGTTCTTCT CGCCGCTGGC CTCCAGCGTA
CCGGCCTTCG CCACCGCACC AGCGCTGCTG TTCGTCGCCG TGTTGATGAC TTCGGGCCTG
GCGGAAATAG ACTGGGAAGA CATCACCGTC GCCGCGCCGG TCGTGGTCAC CGCCCTGGCG
ATGCCTTTCA CCTATTCCAT CGCCAACGGC ATCGCCTTCG GCTTCATCGC CTGGACTGCG
ATCAAACTGC TGTCCGGCCG CGCCCGTGAG CTGAACCCGG CGCTGGTGAT CCTGTCGATT
CTGTTCGTGA TCAAGCTGGG TTGGTTCAAC GCATGA
 
Protein sequence
MLERLFQLKA HNTNVRTEIL AGVTTFLAMA YILFVNPSIL GETGMDKGAV FVATCLAAAI 
GSTVMGLIAN YPIALAPGMG LNAFFTYTVV LHMGHTWQVA LGAVFISAVC FFLLSIFRIR
EWIINSIPLP LRSAIAAGIG LFLALIALHN AGIVVSNPAT MVGLGDLKQP APILATLGFA
LIVALEALKV RGAVLIGILA VTIVSIVMGF TPFGGVTSMP PSLAPTFLQL DIKGALDIGL
VSVIFAFLFV DLFDNSGTLI GVAKRAGLMG KDGHMPKMGR ALIADSTAAM AGSLLGTSTT
TSYIESAAGV SAGGRTGLTA IVVAILFLLA LFFSPLASSV PAFATAPALL FVAVLMTSGL
AEIDWEDITV AAPVVVTALA MPFTYSIANG IAFGFIAWTA IKLLSGRARE LNPALVILSI
LFVIKLGWFN A