Gene Pfl01_4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4893 
Symbol 
ID3714250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5516505 
End bp5517941 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content60% 
IMG OID 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_350621 
Protein GI77461114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.455192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTT TAGAGGCCCT GGATCTCGCC CGAATTCAGT TCGCATTCAC CATCTCGTTC 
CACATCCTGT TCCCGGCGAT CACCATCGGT CTTGCGAGCT ATCTCGCGGT GCTGGAAGGC
CTGTGGCTGA AAACCGGCAA CGACACCTAC CGTGATCTTT ATCACTTCTG GTCGAAGATC
TTTGCCGTCA ACTTCGGCAT GGGCGTGGTC TCGGGCCTGG TCATGGCTTA CCAGTTCGGC
ACCAACTGGA GTCGCTTCTC GGACTTCGCC GGCTCCGTTA CCGGGCCGTT GCTGACGTAT
GAAGTGCTCA CGGCGTTCTT CCTCGAAGCC GGTTTCCTCG GGGTGATGCT GTTCGGCTGG
AACAAGGTCG GGCGCGGCCT GCACTTTTTC TCCACGGTGA TGGTCGCCAT CGGCACACTG
ATTTCGACCT TCTGGATTCT CGCTTCCAAC AGCTGGATGC AGACCCCGCA GGGCTTCGAG
ATCGTCAACG GTCAGGTCAT TCCAACCGAC TGGCTGGCAA TTGTCTTCAA CCCATCGTTC
CCCTATCGCC TGATGCACAT GGCGACCGCA GCGTTCGTCG CAACGGCGTT CTTCGTCGGT
TCGTCAGCGG CCTGGCACCT GCTGCGCGGC AAGGACAACC CGGCGATCCG CACCATGCTG
TCGATGGCGA TGTGGATGGC GTTGATCGTT GCGCCGATCC AGGCTGTCAT CGGCGACTTC
CACGGCCTCA ACACCCTCGA GCATCAGCCA GCGAAAATCG CTGCGATCGA AGGCCACTGG
GAAAACGTCG GCGACGAAGC GACACCGCTG ATTCTGTTCG GCTGGCCGGA CATGAAGGAA
GAAAAAACCA AGTTCGCTGT CGAGATTCCA TACCTCGGCA GCCTGATCCT GACCCACTCG
CTGGACAAGC AAGTCCCGGC GCTCAAGGAG TTCCCGCCAG AAGACCGGCC GAATTCCACC
ATCGTGTTCT GGTCGTTCCG GATCATGGTC GGCCTCGGCT TCCTGATGAT CTTCACCGGT
CTGTGGAGTT TGTGGCTGCG CAAGCGTGAC TCGCTCTACA CCTCGCGGCC GTTCCTGTAC
CTGGCGTTGT GGATGGGGCC GTCCGGTCTG ATCGCGATCC TGGCGGGCTG GTTCACCACT
GAAATCGGTC GTCAGCCGTG GGTGGTCTAC GGGCTGATGC GCACGGCGGA CGCGTCTTCC
AACCACAGTT TCATGCAGAT GAGCATCACG CTGATCATGT TCGTGGTGGT GTACTTCGCG
CTGTTCGGTG CGGGTCTGGG CTACATGATG CGTCTGGTGC GCAAAGGACC GAAGACCGAC
GAAGGCAAGG AAACCAACGA AGGTGGTCCT GGCCAGAAAC GTACGCCGGC CCGTCCGTTG
TCCGCTGCCG ACGACGATGG TGCCGAACAC GACCGCAGCC TGACCAAGGA GATTTGA
 
Protein sequence
MFGLEALDLA RIQFAFTISF HILFPAITIG LASYLAVLEG LWLKTGNDTY RDLYHFWSKI 
FAVNFGMGVV SGLVMAYQFG TNWSRFSDFA GSVTGPLLTY EVLTAFFLEA GFLGVMLFGW
NKVGRGLHFF STVMVAIGTL ISTFWILASN SWMQTPQGFE IVNGQVIPTD WLAIVFNPSF
PYRLMHMATA AFVATAFFVG SSAAWHLLRG KDNPAIRTML SMAMWMALIV APIQAVIGDF
HGLNTLEHQP AKIAAIEGHW ENVGDEATPL ILFGWPDMKE EKTKFAVEIP YLGSLILTHS
LDKQVPALKE FPPEDRPNST IVFWSFRIMV GLGFLMIFTG LWSLWLRKRD SLYTSRPFLY
LALWMGPSGL IAILAGWFTT EIGRQPWVVY GLMRTADASS NHSFMQMSIT LIMFVVVYFA
LFGAGLGYMM RLVRKGPKTD EGKETNEGGP GQKRTPARPL SAADDDGAEH DRSLTKEI