Gene Pfl01_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4892 
Symbol 
ID3714249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5515494 
End bp5516501 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content60% 
IMG OID 
Productcytochrome bd ubiquinol oxidase, subunit II 
Protein accessionYP_350620 
Protein GI77461113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTG ATCTTCCGCT GATCTGGGCC GTGATCATCA TCTTCGGCAT CATGATGTAC 
GTGGTCATGG ACGGTTTCGA TCTGGGGATC GGGATTCTCT TTCCGTTCAT CCCCGGCAAG
ACCGACCGCG ACGTGATGAT GAACACCGTC GCCCCGGTGT GGGACGGCAA CGAAACCTGG
CTGGTACTGG GCGGCGCTGC GTTGTTCGGC GCCTTCCCGT TGGCTTATTC AGTGGTGTTG
TCGGCGCTGT ACCTGCCGCT GATTTTCATG CTGATCGGGC TGATCTTCCG TGGCGTGGCG
TTCGAGTTCC GCTTCAAGGC CAAGGACGAC AAGCGTCACC TGTGGGACAA GGCATTCATC
GGTGGTTCGA TTGCCGCAAC GTTTTTCCAG GGTGTGGCGC TGGGCGCGTT CATCGATGGT
CTGCCAGTGG TCAACCGGCA ATATGCCGGC GGTTCACTGG ACTGGCTGAC GCCGTTCACG
CTGTTCTGCG GCGCCGCACT GGTGGTGGCG TATGCCTTGC TCGGCTGCAC CTGGCTGATC
ATGAAGACCG AAGGCAAGTT GCAGGAACAG ATGCATGACC TGGCGCGACC TTTGGCCTTC
GTGCTGTTGG CGGTGATCGG TGTCGTCAGT CTGTGGACGC CGCTGGCCCA TCCGGAAATT
GCGACGCGCT GGTTCAGCAT GCCGAATCTG TTCTGGTTCA TGCCGGTGCC GATTCTGGTG
CTGGTGACGA TGTACGGTCT GATTCGCGCG GTGGCACGCA ATGCCAACTA CATGCCGTTC
CTGCTGACCC TGGTGCTGAT CTTCCTCGGC TACAGCGGTC TGGGCATCAG CCTGTGGCCG
AACATCGTGC CGCCGTCGAT CTCGATCTGG GACGCCGCCG CACCACCGCA AAGCCAGGGC
TTCATGCTGG TGGGCACGCT GTTCATCATC CCGTTCATCC TGGGTTACAC CTTCTGGAGC
TATTACGTGT TCCGCGGCAA GGTCACCCAT GAAGACGGTT ATCACTAA
 
Protein sequence
MGIDLPLIWA VIIIFGIMMY VVMDGFDLGI GILFPFIPGK TDRDVMMNTV APVWDGNETW 
LVLGGAALFG AFPLAYSVVL SALYLPLIFM LIGLIFRGVA FEFRFKAKDD KRHLWDKAFI
GGSIAATFFQ GVALGAFIDG LPVVNRQYAG GSLDWLTPFT LFCGAALVVA YALLGCTWLI
MKTEGKLQEQ MHDLARPLAF VLLAVIGVVS LWTPLAHPEI ATRWFSMPNL FWFMPVPILV
LVTMYGLIRA VARNANYMPF LLTLVLIFLG YSGLGISLWP NIVPPSISIW DAAAPPQSQG
FMLVGTLFII PFILGYTFWS YYVFRGKVTH EDGYH