Gene Pfl01_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4890 
Symbol 
ID3714247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5514075 
End bp5515199 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID 
Product16S rRNA m(2)G 1207 methyltransferase 
Protein accessionYP_350618 
Protein GI77461111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGC TCGATACGCC CTTCGCCCAG CTTGATCTGA TCCGCCAGCC CGAACAGCAG 
AACGAACCGC TGCAAGCCTT CGACGCAGCC GACGAATACC TGCTCAATCA TCTGGCCGAA
CAGAATCTGC CGATCGAGAC ACGGGTTCTG GTGCTCAACG ACAGTTTCGG CGCGCTGGCC
ATCAGCCTGT CAGGCAACGT GCAGGTCAGC ACCAGCGGCG ATTCGTTCCT GGCGTTTCAA
GGCCTTGAAA AAAACCTGCT GCGCAATGGT CAGGCATTCG ATGCGCTGCG CGGCATTCCC
GCCAGCGAGC CGTTGGTCGG GCCATTTGAC CGGGTGCTGA TCCGCGTTCC GAAAACCCTG
GCACTGCTGG AAGAACAACT GATTCGCCTG CAAGGCCAAT TGGCGCCCGG CGCGCAAGTG
GTCGCCGCAG CCATGGTCAA ACATCTGCCC CGCGCCGCCG GTGATCTGCT GGAACGCTAT
ATCGGCCCGG TTCAGGCTTC GCTGGCGGTG AAGAAGGCAC GCTTGCTGAT CGCCACGCCC
GAGGCGAAGG CACCCGCTGT CTCGCCCTAC CCGACCCGTT ATCGCCTCGA CGAGCCGGCC
ATCGAACTGC TCAACCATGC CAACGTGTTC TGCCGTGAAG GGCTGGACAT CGGCACCCGT
GCCTTCCTTC CGCACCTGCC GAAAAACCTC GGCGCGGCAG GGGTCGCCGA CCTAGGCTGC
GGTAACGGCG TACTGGCCAT CGCCAGCGCC CTGCAAAACC CAGATGCGCA TTACACGCTG
GTGGACGAAT CGTTCATGGC CGTGCAGTCG GCGGCCGAAA ACTGGCGCGC GGCGCTGGGT
GAACGTGAAG CGATCGTGCG CGCAGGCGAC GGCCTTGCCG GACAGGAAGC GCAATCGCTG
GATGTGGTGC TGTGCAACCC GCCGTTTCAC CAGCAACAGG TGGTCGGCGA CTTCCTTGCC
TGGCGCATGT TCCAGCAGGC CCGCGAAGCA CTGGTCGTCG GTGGTGCGCT GTACATCGTC
GGCAACCGTC ACCTGGGTTA TCACAGCAAA CTGGCGCGAC TGTTCCGGGG TGTCGAGCAG
GTCGCGGCCA CGCCGAAATT CGTGATCCTC AAGGCACGCA AATAA
 
Protein sequence
MPLLDTPFAQ LDLIRQPEQQ NEPLQAFDAA DEYLLNHLAE QNLPIETRVL VLNDSFGALA 
ISLSGNVQVS TSGDSFLAFQ GLEKNLLRNG QAFDALRGIP ASEPLVGPFD RVLIRVPKTL
ALLEEQLIRL QGQLAPGAQV VAAAMVKHLP RAAGDLLERY IGPVQASLAV KKARLLIATP
EAKAPAVSPY PTRYRLDEPA IELLNHANVF CREGLDIGTR AFLPHLPKNL GAAGVADLGC
GNGVLAIASA LQNPDAHYTL VDESFMAVQS AAENWRAALG EREAIVRAGD GLAGQEAQSL
DVVLCNPPFH QQQVVGDFLA WRMFQQAREA LVVGGALYIV GNRHLGYHSK LARLFRGVEQ
VAATPKFVIL KARK