Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4887 |
Symbol | mscL |
ID | 3714244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5511613 |
End bp | 5512077 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_350615 |
Protein GI | 77461108 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATTT ACACTGCGTA CACCAAACTC ATCTGTAACA AGGAAATAAC TATGGGCGTG CTCAGCGAGT TCAAGGCCTT CGCGGTCAAA GGCAATGTGG TCGACATGGC CGTCGGTATC ATCATCGGCG CGGCCTTCGG CAAAATCGTT TCGTCGTTTG TCGGCGATGT GATCATGCCG CCAATCGGCC TGCTGATCGG CGGAGTGGAT TTCAGTGACC TGGCCATCAC GCTGAAAGCC GCCGAGGGCA GCGCCCCTGC GGTGGTGCTG GCGTACGGTA AATTCATCCA GAGCGTTCTT GACTTCGTGA TCGTCGCCTT CGCGATTTTC ATGGGCGTCA AAGCCATCAA CCGCTTGAAA CGCGAAGAAG CCGTAGCGCC TACCTTGCCG CCCGTGCCGA CCAAGGAAGA AGAACTGCTG GGCGAGATCC GCGATCTGCT CAAGGCCCAG AACAACCGGC CCTGA
|
Protein sequence | MLIYTAYTKL ICNKEITMGV LSEFKAFAVK GNVVDMAVGI IIGAAFGKIV SSFVGDVIMP PIGLLIGGVD FSDLAITLKA AEGSAPAVVL AYGKFIQSVL DFVIVAFAIF MGVKAINRLK REEAVAPTLP PVPTKEEELL GEIRDLLKAQ NNRP
|
| |