Gene Pfl01_4886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4886 
Symbol 
ID3714243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5509840 
End bp5511378 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content56% 
IMG OID 
Productcatalase-like 
Protein accessionYP_350614 
Protein GI77461107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA CACTTGGTTC AGGGATTATT CCCCGTCGCA CCATTGGCGT ATTGGCCGCC 
AGCCTGCTGA CCCTTTCCGT GAACGCCGCC CCCCTGACCC GGGATAACGG TGCGGCAGTC
GGCGACAACC AGAACTCGCA AACCGCCGGC GCCAATGGCC CGGTGCTGTT GCAGGACGTG
CAACTGATCC AGAAGCTGCA ACGTTTCGAC CGTGAACGCA TTCCCGAACG TGTCGTGCAT
GCTCGCGGCA CCGGTGCCCA TGGCACGTTC ACCACAACCA ACGATCTGAG TGATCTGAGC
AAGGCCAAGG TGTTTACCGC CGGCCAGGTC ACGCCGGTGT TCGTACGTTT CTCGGCGGTG
GTTCACGGCA ATCACTCTCC GGAAACCCTG CGTGACCCTC GGGGGTTCGC AACCAAGTTC
TACACCGCTG ACGGCAATTG GGATCTGGTG GGCAACAACT TTCCGACGTT CTTCATCCGC
GATGCGATCA AGTTTCCGGA CATGGTGCAT GCCTTCAAGC CCGATCCGCG TACTAACCTT
GACGATGACT CGCGTCGCTT CGATTTCTTC TCCCATGTAC CGGAAGCTAC CCGCACATTG
ACCGAGTTGT ATTCCAACTC GGGCACTCCG GCCAGCTATC GGGAGATGGA CGGCAATAGT
GTGCACGCCT ACAAGTTGGT TAACGCCAAG GGCGATGTGC ACTATGTGAA GTTTCACTGG
AAAAGTTTGC AAGGCATCAA AAATCTCGAT CCGAAACAAG TTGAGAAAGT TCAGGGGCGC
GACTACAGCC ACATGACTCA CGACTTGGTA GAAAACATTC AAAAAGGAAA CTTTCCCAAG
TGGGACTTGT ACATTCAAGT CTTGAATCCG CAAGACTTGT CCAAGTTTGA ATTCGATCCT
CTTGATGCAA CCAAGATCTG GCCAGGTGTT CCAGAGCGAA AAGTTGGACA AATGGTGTTG
AACCGTAATC CTGCGAATGT CTTCCAGGAA ACTGAACAGG TCGCCATGGC GCCATCGAAT
GTGGTGCCGG GCATCGAGCC TTCGGAAGAC CGTCTGTTGC AAGGCCGGAT ATTTGCCTAC
GCCGATACCC AGATGTATCG CCTTGGCGCC AACGCCCTGC AATTGCCGAT CAATGCCGCC
AAAACTGCTG TCAACAATGG CAATCAGGAT GGCGCGATGA ATGCCGGTGC GAGCACCTCG
GGCGTCAACT ATGAGCCTAG CCGTCTGCAG CCGCGTGAAG AGACGGCAGG CGCGCGATAC
AGCCAGACCG CGCTGCAGGG CAGCACGCAA CAGGCGAAGA TCCAGCGTGA ACAGAACTTC
AAGCAGGCCG GAGATCTGTA TCGCTCGTTC AGCAAGAAGG AACGTCAGGA TCTGATCGAG
AGCTTTGGCG GTTCGCTGGC GAGTGCCGAT GACGAGAGCA AGCACATCAT GCTGTCCTTC
CTCTATAAGG CGGATCCGGA ATACGGCGCC GGGGTGACCA AAGTGGCCAA GGGTGACCTG
AGTCGGGTCA AGGCGTTGGC GGCCAAACTG GCCGACTGA
 
Protein sequence
MNSTLGSGII PRRTIGVLAA SLLTLSVNAA PLTRDNGAAV GDNQNSQTAG ANGPVLLQDV 
QLIQKLQRFD RERIPERVVH ARGTGAHGTF TTTNDLSDLS KAKVFTAGQV TPVFVRFSAV
VHGNHSPETL RDPRGFATKF YTADGNWDLV GNNFPTFFIR DAIKFPDMVH AFKPDPRTNL
DDDSRRFDFF SHVPEATRTL TELYSNSGTP ASYREMDGNS VHAYKLVNAK GDVHYVKFHW
KSLQGIKNLD PKQVEKVQGR DYSHMTHDLV ENIQKGNFPK WDLYIQVLNP QDLSKFEFDP
LDATKIWPGV PERKVGQMVL NRNPANVFQE TEQVAMAPSN VVPGIEPSED RLLQGRIFAY
ADTQMYRLGA NALQLPINAA KTAVNNGNQD GAMNAGASTS GVNYEPSRLQ PREETAGARY
SQTALQGSTQ QAKIQREQNF KQAGDLYRSF SKKERQDLIE SFGGSLASAD DESKHIMLSF
LYKADPEYGA GVTKVAKGDL SRVKALAAKL AD