| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4880 |
|---|
| Symbol | |
|---|
| ID | 3714237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5503752 |
|---|
| End bp | 5504447 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_350608 |
|---|
| Protein GI | 77461101 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTC TTGCCACGCC GTCGCACCCT CGCCCGACCT CGGCGGCCCT GCCCTTCTCC
CGCCTGCAAG CGCCGGTGGA CGATCTGTAT CCGCGCCTGT TCGACGCAAT CCTGGAGCAA
CGCATCGATG CCGCCAGCCG TTTCACCGAA GAAAGTCTCA AGCAGATGTT CGGCGTCAGC
CGCGCCGATG TGCGTCGGGT GCTGACCCAG CTGTCCCACG AACAGATCAT CGTGCTGCGG
GCCAACCATC GACCACGAGT GGCCGCGCCG GACGCCGAGC AGACACGTCA GGCCCTGCAC
GCCCGGCGCT TGGCCGAGAA CACGCTGGTG CGGCTGGCTT GTCAGCATGC GCAGGCTGAA
GATTTGAAGC GCCTGCGAGC ACTGATCGAA CGGGAGCGTC AAGCTGTGGA TCAAGATCGG
CGCGGGGCGG CAATTCGCCT GTCCGGGGAG TTTCATTTGC AGGTAGCGAA AATGGCGCAG
AATGCACCTT TGGCGCATTT TCTCGGCACG TTGGTGCCGT TGACCTCACT GGCGATTGCG
CGATGCACAG AAACCACGCA CAGCTGTTGC GGCTGGCAGG ATCACGCCCG GATCGTCGAG
GCGATCGAGC GTGATGACTC CGTCGAGGCG GCGTCGCTGA TGAACCGTCA TCTGGATCAC
CTGGAGCAGA CGATTCTCAG CGGCTCCACG CACTGA
|
|---|
| Protein sequence | MNSLATPSHP RPTSAALPFS RLQAPVDDLY PRLFDAILEQ RIDAASRFTE ESLKQMFGVS
RADVRRVLTQ LSHEQIIVLR ANHRPRVAAP DAEQTRQALH ARRLAENTLV RLACQHAQAE
DLKRLRALIE RERQAVDQDR RGAAIRLSGE FHLQVAKMAQ NAPLAHFLGT LVPLTSLAIA
RCTETTHSCC GWQDHARIVE AIERDDSVEA ASLMNRHLDH LEQTILSGST H
|
|---|
| |