Gene Pfl01_4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4878 
Symbol 
ID3716237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5501660 
End bp5502973 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content60% 
IMG OID 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_350606 
Protein GI77461099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGAT GGTGCTCGCG TTCAATCTTC CTCCAAGTGG TTCTCGGACT GATGCTCGGC 
ATCGTCTGCG GACTGACCCT TCCCGAATAC TCGGCCCAGC TCAAACCGCT CGGCGACGGT
TTCATCAAAC TGATCAAGAT GCTCATCGGC CTGATCGTGT TCTGCGTGGT GGTCAGCGGC
ATCAGTGGCG CCGGCGACTT GAAGAAGGTC GGGCGCATCG GCCTCAAGTC GGTTATCTAC
TTCGAAGTAC TGACCACCAT CGCCCTGGTG ATCGGTCTGG TGTTTGCCTT CACCACCGGG
ATCGGCAGCG GCGCCAATAT CCATCTGGAG CAGCTGTCCG CCGCCGACAT GGGCGACATC
GCCGAACGCG GCCAGCACAT GCACACCACC ACCCAGTTCC TGATGGACCT GATCCCGACT
TCGGTACTCG GCGCCTTTGC CGACAACAAC ATCCTACAAG TGCTGTTGTT CTCGGTGCTG
TTCGGCAGCG CGTTGAATCT GGTGGGCGAA GCGGCTTCCG GGATCTCGCG GCTGATCAAC
GAACTGAGCC ATGTGATCTT CCGCATCATG GGCATGATCG TGCGTCTGGC TCCGATCGGC
GTGTTCGGCG CCATCGCCTT CACCACCAGC AAATATGGCC TGGATTCGCT GCAACACCTG
GGCAGCCTGG TCGGTTTGTT CTACCTGACC TGCATCGCTT TCGTCGCGCT GATTCTCGGT
CTGGTAATGC GTCTTTCCGG CCTGCGCATG TGGCCGTTGC TCAAGTACCT GCGTGAAGAG
TTGCTGATCG TCATGGGCAC CGCGTCCTCC GACGCCGTGC TGCCGCAGAT CATGCGCAAG
CTTGAACATC TGGGCATCGG CAGCTCGACT GTCGGGCTGG TGATTCCCAC CGGTTACTCG
TTCAACCTCG ACGGTTTTTC GATCTACCTG ACCCTGGCCA TCGTGTTCAT CGCCAACGCC
ACCGGTACAC CGCTGGCCAT GACCGATCTG CTGACGATTT TGCTGGTATC GCTGATTACC
TCCAAAGGTG CCCACGGCAT TCCCGGTTCG GCGCTGGTGA TTCTCGCGGC CACGCTGACG
GCGATCCCGG CGATCCCGGT GGTCGGTCTG GTGCTGGTAC TGGCGGTGGA CTGGTTCATG
GGCATCGGCC GGGCGCTGAC CAACCTGATC GGCAACTGCG TCGCCACCGT GGCCATCGCC
CGTTGGGAAA AGGACATCGA CGTGCAGCGG GCGAACAAGG TGCTCAACGG CGAGCAGGGC
TATAACTTTC AGCCGAGAAA AACGGTCGCT CAAGCGGCGG CCAAAGAATT CTGA
 
Protein sequence
MLRWCSRSIF LQVVLGLMLG IVCGLTLPEY SAQLKPLGDG FIKLIKMLIG LIVFCVVVSG 
ISGAGDLKKV GRIGLKSVIY FEVLTTIALV IGLVFAFTTG IGSGANIHLE QLSAADMGDI
AERGQHMHTT TQFLMDLIPT SVLGAFADNN ILQVLLFSVL FGSALNLVGE AASGISRLIN
ELSHVIFRIM GMIVRLAPIG VFGAIAFTTS KYGLDSLQHL GSLVGLFYLT CIAFVALILG
LVMRLSGLRM WPLLKYLREE LLIVMGTASS DAVLPQIMRK LEHLGIGSST VGLVIPTGYS
FNLDGFSIYL TLAIVFIANA TGTPLAMTDL LTILLVSLIT SKGAHGIPGS ALVILAATLT
AIPAIPVVGL VLVLAVDWFM GIGRALTNLI GNCVATVAIA RWEKDIDVQR ANKVLNGEQG
YNFQPRKTVA QAAAKEF