Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4878 |
Symbol | |
ID | 3716237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5501660 |
End bp | 5502973 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_350606 |
Protein GI | 77461099 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGAT GGTGCTCGCG TTCAATCTTC CTCCAAGTGG TTCTCGGACT GATGCTCGGC ATCGTCTGCG GACTGACCCT TCCCGAATAC TCGGCCCAGC TCAAACCGCT CGGCGACGGT TTCATCAAAC TGATCAAGAT GCTCATCGGC CTGATCGTGT TCTGCGTGGT GGTCAGCGGC ATCAGTGGCG CCGGCGACTT GAAGAAGGTC GGGCGCATCG GCCTCAAGTC GGTTATCTAC TTCGAAGTAC TGACCACCAT CGCCCTGGTG ATCGGTCTGG TGTTTGCCTT CACCACCGGG ATCGGCAGCG GCGCCAATAT CCATCTGGAG CAGCTGTCCG CCGCCGACAT GGGCGACATC GCCGAACGCG GCCAGCACAT GCACACCACC ACCCAGTTCC TGATGGACCT GATCCCGACT TCGGTACTCG GCGCCTTTGC CGACAACAAC ATCCTACAAG TGCTGTTGTT CTCGGTGCTG TTCGGCAGCG CGTTGAATCT GGTGGGCGAA GCGGCTTCCG GGATCTCGCG GCTGATCAAC GAACTGAGCC ATGTGATCTT CCGCATCATG GGCATGATCG TGCGTCTGGC TCCGATCGGC GTGTTCGGCG CCATCGCCTT CACCACCAGC AAATATGGCC TGGATTCGCT GCAACACCTG GGCAGCCTGG TCGGTTTGTT CTACCTGACC TGCATCGCTT TCGTCGCGCT GATTCTCGGT CTGGTAATGC GTCTTTCCGG CCTGCGCATG TGGCCGTTGC TCAAGTACCT GCGTGAAGAG TTGCTGATCG TCATGGGCAC CGCGTCCTCC GACGCCGTGC TGCCGCAGAT CATGCGCAAG CTTGAACATC TGGGCATCGG CAGCTCGACT GTCGGGCTGG TGATTCCCAC CGGTTACTCG TTCAACCTCG ACGGTTTTTC GATCTACCTG ACCCTGGCCA TCGTGTTCAT CGCCAACGCC ACCGGTACAC CGCTGGCCAT GACCGATCTG CTGACGATTT TGCTGGTATC GCTGATTACC TCCAAAGGTG CCCACGGCAT TCCCGGTTCG GCGCTGGTGA TTCTCGCGGC CACGCTGACG GCGATCCCGG CGATCCCGGT GGTCGGTCTG GTGCTGGTAC TGGCGGTGGA CTGGTTCATG GGCATCGGCC GGGCGCTGAC CAACCTGATC GGCAACTGCG TCGCCACCGT GGCCATCGCC CGTTGGGAAA AGGACATCGA CGTGCAGCGG GCGAACAAGG TGCTCAACGG CGAGCAGGGC TATAACTTTC AGCCGAGAAA AACGGTCGCT CAAGCGGCGG CCAAAGAATT CTGA
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Protein sequence | MLRWCSRSIF LQVVLGLMLG IVCGLTLPEY SAQLKPLGDG FIKLIKMLIG LIVFCVVVSG ISGAGDLKKV GRIGLKSVIY FEVLTTIALV IGLVFAFTTG IGSGANIHLE QLSAADMGDI AERGQHMHTT TQFLMDLIPT SVLGAFADNN ILQVLLFSVL FGSALNLVGE AASGISRLIN ELSHVIFRIM GMIVRLAPIG VFGAIAFTTS KYGLDSLQHL GSLVGLFYLT CIAFVALILG LVMRLSGLRM WPLLKYLREE LLIVMGTASS DAVLPQIMRK LEHLGIGSST VGLVIPTGYS FNLDGFSIYL TLAIVFIANA TGTPLAMTDL LTILLVSLIT SKGAHGIPGS ALVILAATLT AIPAIPVVGL VLVLAVDWFM GIGRALTNLI GNCVATVAIA RWEKDIDVQR ANKVLNGEQG YNFQPRKTVA QAAAKEF
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