Gene Pfl01_4871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4871 
Symbol 
ID3716230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5489715 
End bp5491568 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350599 
Protein GI77461092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.398747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAC GCCTTGCCTG GCTGGCGCTG TGTGTCTGCG CCCCGCTGTC CGCCGCGCCC 
CACATCGACC CTCAACGTTT GCAGCAACTG GCCAACGACC GATTCTGGAT TTCCCTCGGC
CATTACGAAA CCGCCAAGCT CGGTGGCTGG CGCAGCTACG TCAGTGACAA AAAATTCTTC
CTCGCCCCCG ACGGCAACGA ACACCCCGAC CATGAACTGG CCGCCACCGT GCAGGCGCTG
TACGCCCCCG CCAGTCTCGG TGAGCAACAC GCCCAGTGCG TCTACCCGGC ACGCACCCGC
TGGCTGAAAG ATCAACTCAA CCTGACCGAC CTGCCGACGC CGGACTGCGC CGAATTCAAG
AAATGGTTCA AGGACGTCTC CCCCCACAGC GCAGTGATGA TTTTCCCGGC GGCCTATCTC
AACAGCCCGT CGTCGATGTT CGGCCATACC CTGCTGCGCA TCGACCAGGC CGACGTGCAA
AGCGACAAGA CTTCGCTGCT CAGTTACGCG ATCAACTTCG GCGCCTACAT CGAAGGCTCG
GACAACAGCA TTCTTTACGC CTGGAAAGGC CTGATGGGTG GTTATCCGGG ACTGTTCGCG
CTGGTGCCGT ATCAGGAAAA ACTCTCGGAA TACCGCAGCC TGGAAAACCG CGACCTGTGG
GAATACCGGC TCAATCTGAC GCAAGCCGAA ACAGCGCGGA TGGTCGAGCA TGTGTGGGAG
CTGAAGCAGA TCCAGTTCGA CTACTTCTTC TTCGATGAAA ACTGCTCCTA TCGCCTGCTC
GAACTGTTGC AGGTCGCCCG TCCGAGCCTG CGCCTGACCG AGCAATTCCC GCTGACGGCG
ATCCCCACCG ACACCGTCAA AGCGGTGAAG GAAGCCGGTC TGGTCGAGCA CATCGAATAC
CGCCCGTCCC GCGAGCGCGA ATTGCTCAGC CGCGCCGAAC CCCTGAGCGG CGAAGAACAG
GACTGGGTGC TGAAGGTCAG CGCCGATCAA CAGCAACTTC AGGACCCGGC CTTCAAGGCC
CTGCCTCGGG ATCGCCAGGC GCTGATTGTT GACGCGGCGT ATCGGCTGGA GCGCTACCGC
GCCAACGGCC AGGAACGGGA TCCACTGCGC GCCCAGCGCA GTTTCGAACT GCTGCGGGCG
ATCAACAAGA ACCCGGCGCC GGAGCTGCAG ATTCCTCAAC CGGGCCTGCC CGAAGACGGA
CACGAATCGC GCACCTGGCA GGCCGGTCTC GGCACTCGCG GTGACCGCGC ATTCGGCGAG
TACGGCTTGC GCATGGCCTA TCACGACCTC AACGACAACG CCGAGAGTTT CCCCCTCGGC
GCACAGATCG AAATCCTGCA GATGAAGCTG CGCCAGTACG AAGGCAATCA CTGGCAGTTC
CAGCAACTGG ATCTGGCGAC CATCCGCTCG CTGACGCCGC GCAATGCGCT GTTGCAACCG
CTGTCGTGGC AAGTCACCGG TGGTCTTGAA CGCGTACCGG GCAAGCACGA TGACGAGACA
TTGGTCAGCC ACGTCAACGG TGGCGGTGGC GGCACCTGGG CGTTGGCTGA CGATGTGCTG
GGGTTCGCCC TCGGCACGGT GCGCGTTGAA CACAACAATG ATTTCGCCGA GTTCGTTTCC
CCCGCAGGCG GTTTCAATAC CGGCGTACTG TGGAAAAACC CGTTGGGCAA TCTCAGCCTG
GAGGCCAAAG GTGATTACTT CTTCAACGGT GAAGTACGCC GTAGCCTGAG CCTGAATCAG
CAGTGGGAAT TGTCGCGCAA CCTCGGCCTG CGTCTGAGCG CCCAGCGTGA GTTCAGCCAT
CTGGCCACGC CGGAGACCGA AGTGATGCTG GAAGTGAAGT GGTATCACTA CTGA
 
Protein sequence
MLKRLAWLAL CVCAPLSAAP HIDPQRLQQL ANDRFWISLG HYETAKLGGW RSYVSDKKFF 
LAPDGNEHPD HELAATVQAL YAPASLGEQH AQCVYPARTR WLKDQLNLTD LPTPDCAEFK
KWFKDVSPHS AVMIFPAAYL NSPSSMFGHT LLRIDQADVQ SDKTSLLSYA INFGAYIEGS
DNSILYAWKG LMGGYPGLFA LVPYQEKLSE YRSLENRDLW EYRLNLTQAE TARMVEHVWE
LKQIQFDYFF FDENCSYRLL ELLQVARPSL RLTEQFPLTA IPTDTVKAVK EAGLVEHIEY
RPSRERELLS RAEPLSGEEQ DWVLKVSADQ QQLQDPAFKA LPRDRQALIV DAAYRLERYR
ANGQERDPLR AQRSFELLRA INKNPAPELQ IPQPGLPEDG HESRTWQAGL GTRGDRAFGE
YGLRMAYHDL NDNAESFPLG AQIEILQMKL RQYEGNHWQF QQLDLATIRS LTPRNALLQP
LSWQVTGGLE RVPGKHDDET LVSHVNGGGG GTWALADDVL GFALGTVRVE HNNDFAEFVS
PAGGFNTGVL WKNPLGNLSL EAKGDYFFNG EVRRSLSLNQ QWELSRNLGL RLSAQREFSH
LATPETEVML EVKWYHY