Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4871 |
Symbol | |
ID | 3716230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5489715 |
End bp | 5491568 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350599 |
Protein GI | 77461092 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.398747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAAC GCCTTGCCTG GCTGGCGCTG TGTGTCTGCG CCCCGCTGTC CGCCGCGCCC CACATCGACC CTCAACGTTT GCAGCAACTG GCCAACGACC GATTCTGGAT TTCCCTCGGC CATTACGAAA CCGCCAAGCT CGGTGGCTGG CGCAGCTACG TCAGTGACAA AAAATTCTTC CTCGCCCCCG ACGGCAACGA ACACCCCGAC CATGAACTGG CCGCCACCGT GCAGGCGCTG TACGCCCCCG CCAGTCTCGG TGAGCAACAC GCCCAGTGCG TCTACCCGGC ACGCACCCGC TGGCTGAAAG ATCAACTCAA CCTGACCGAC CTGCCGACGC CGGACTGCGC CGAATTCAAG AAATGGTTCA AGGACGTCTC CCCCCACAGC GCAGTGATGA TTTTCCCGGC GGCCTATCTC AACAGCCCGT CGTCGATGTT CGGCCATACC CTGCTGCGCA TCGACCAGGC CGACGTGCAA AGCGACAAGA CTTCGCTGCT CAGTTACGCG ATCAACTTCG GCGCCTACAT CGAAGGCTCG GACAACAGCA TTCTTTACGC CTGGAAAGGC CTGATGGGTG GTTATCCGGG ACTGTTCGCG CTGGTGCCGT ATCAGGAAAA ACTCTCGGAA TACCGCAGCC TGGAAAACCG CGACCTGTGG GAATACCGGC TCAATCTGAC GCAAGCCGAA ACAGCGCGGA TGGTCGAGCA TGTGTGGGAG CTGAAGCAGA TCCAGTTCGA CTACTTCTTC TTCGATGAAA ACTGCTCCTA TCGCCTGCTC GAACTGTTGC AGGTCGCCCG TCCGAGCCTG CGCCTGACCG AGCAATTCCC GCTGACGGCG ATCCCCACCG ACACCGTCAA AGCGGTGAAG GAAGCCGGTC TGGTCGAGCA CATCGAATAC CGCCCGTCCC GCGAGCGCGA ATTGCTCAGC CGCGCCGAAC CCCTGAGCGG CGAAGAACAG GACTGGGTGC TGAAGGTCAG CGCCGATCAA CAGCAACTTC AGGACCCGGC CTTCAAGGCC CTGCCTCGGG ATCGCCAGGC GCTGATTGTT GACGCGGCGT ATCGGCTGGA GCGCTACCGC GCCAACGGCC AGGAACGGGA TCCACTGCGC GCCCAGCGCA GTTTCGAACT GCTGCGGGCG ATCAACAAGA ACCCGGCGCC GGAGCTGCAG ATTCCTCAAC CGGGCCTGCC CGAAGACGGA CACGAATCGC GCACCTGGCA GGCCGGTCTC GGCACTCGCG GTGACCGCGC ATTCGGCGAG TACGGCTTGC GCATGGCCTA TCACGACCTC AACGACAACG CCGAGAGTTT CCCCCTCGGC GCACAGATCG AAATCCTGCA GATGAAGCTG CGCCAGTACG AAGGCAATCA CTGGCAGTTC CAGCAACTGG ATCTGGCGAC CATCCGCTCG CTGACGCCGC GCAATGCGCT GTTGCAACCG CTGTCGTGGC AAGTCACCGG TGGTCTTGAA CGCGTACCGG GCAAGCACGA TGACGAGACA TTGGTCAGCC ACGTCAACGG TGGCGGTGGC GGCACCTGGG CGTTGGCTGA CGATGTGCTG GGGTTCGCCC TCGGCACGGT GCGCGTTGAA CACAACAATG ATTTCGCCGA GTTCGTTTCC CCCGCAGGCG GTTTCAATAC CGGCGTACTG TGGAAAAACC CGTTGGGCAA TCTCAGCCTG GAGGCCAAAG GTGATTACTT CTTCAACGGT GAAGTACGCC GTAGCCTGAG CCTGAATCAG CAGTGGGAAT TGTCGCGCAA CCTCGGCCTG CGTCTGAGCG CCCAGCGTGA GTTCAGCCAT CTGGCCACGC CGGAGACCGA AGTGATGCTG GAAGTGAAGT GGTATCACTA CTGA
|
Protein sequence | MLKRLAWLAL CVCAPLSAAP HIDPQRLQQL ANDRFWISLG HYETAKLGGW RSYVSDKKFF LAPDGNEHPD HELAATVQAL YAPASLGEQH AQCVYPARTR WLKDQLNLTD LPTPDCAEFK KWFKDVSPHS AVMIFPAAYL NSPSSMFGHT LLRIDQADVQ SDKTSLLSYA INFGAYIEGS DNSILYAWKG LMGGYPGLFA LVPYQEKLSE YRSLENRDLW EYRLNLTQAE TARMVEHVWE LKQIQFDYFF FDENCSYRLL ELLQVARPSL RLTEQFPLTA IPTDTVKAVK EAGLVEHIEY RPSRERELLS RAEPLSGEEQ DWVLKVSADQ QQLQDPAFKA LPRDRQALIV DAAYRLERYR ANGQERDPLR AQRSFELLRA INKNPAPELQ IPQPGLPEDG HESRTWQAGL GTRGDRAFGE YGLRMAYHDL NDNAESFPLG AQIEILQMKL RQYEGNHWQF QQLDLATIRS LTPRNALLQP LSWQVTGGLE RVPGKHDDET LVSHVNGGGG GTWALADDVL GFALGTVRVE HNNDFAEFVS PAGGFNTGVL WKNPLGNLSL EAKGDYFFNG EVRRSLSLNQ QWELSRNLGL RLSAQREFSH LATPETEVML EVKWYHY
|
| |