| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4821 |
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| Symbol | |
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| ID | 3717257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5441417 |
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| End bp | 5442634 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | type II secretion system protein |
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| Protein accession | YP_350549 |
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| Protein GI | 77461042 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.230252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCA AGGCAGCGAA AATCAGTGTC TATGCCTGGG AAGGCACGGA CCGCAAAGGC
AGCAAGGTGA CCGGCGAGCT GAGCGGCCAG AACCCCGCGC TGGTCAAGGC CCAATTGCGC
AAGCAGGGCA TCAACCCCGG CAAGGTGCGC AAGAAATCCG CCTCGTTGCT GAGCTTCGGC
AAGCGCATCA AGGCCCAGGA CATTGCCCTC TTCACCCGGC AGATGGCGAC CATGATGAAG
GCCGGCGTGC CGCTGTTGCA GTCGTTCGAC ATCATTGGCG AAGGCTTCGA AAACCCGGCC
ATGCGCAAGC TGGTCGACGA GGTGAAACAG GAGGTCGCCG CCGGTAACAG TTTCGCCGCC
GCGCTGCGCA AGAAACCGCA ATATTTCGAC GAGTTGTACT GCAACCTGGT GGATGCCGGC
GAGCAGTCCG GCGCCCTCGA CACCCTGCTG GAGCGGGTCG CGACCTACAA AGAAAAGAGC
GAAAGCCTCA AGGCCAAGAT CAAGAAGGCC ATGACCTACC CGTCGGCCGT GGTGCTGGTG
GCAGCGGTGG TTACCGGGAT TCTGCTGGTC AAGGTGGTGC CGCAGTTCCA GTCGGTGTTC
TCTGGCTTCG GTGCCGAACT GCCAGCCTTC ACGTTGATGG TGATCAGCCT GTCCGAATTC
ATGCAGCAAT GGTGGTGGGC GATTCTCGGT TTGCTGGTGG CCAGTTTTTT CGGCACCCGC
CATGCCCTGA AAAAATCCCA GGCGCTGCGC GACCGGCGTG ACGCCTGGTT TCTCAAGCTG
CCGCTGGTGG GCACATTGAT GTACAAGTCC GCCGTGGCGC GGTTTGCCCG GACCCTGTCG
ACCACCTTCG CGGCCGGCGT GCCACTGGTG GAAGCACTGG ATTCGGTGGC CGGGGCCACC
GGCAACGTAG TGTTCAAGCG CGCCGTGTTG CGCATCCGTC AGGACGTTTC CACCGGCATG
CAGCTGAATT TCTCGATGCG CTCCACCGGC ATCTTTCCGA ACATGGCGGT GCAGATGACC
GCCATCGGCG AAGAGTCCGG CGCACTGGAC GAGATGCTCG ACAAGGTCGC AGGTTTCTAT
GAGGACGAGG TGGACAACAT GGTCGACAAC CTCACCAGCC TGATGGAGCC GTTCATCATG
GTGGTGCTCG GGGTGATCGT CGGCGGTCTG GTGGTGGCGA TGTACCTGCC GATCTTCCAA
CTCGGCTCAG CGATCTGA
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| Protein sequence | MAVKAAKISV YAWEGTDRKG SKVTGELSGQ NPALVKAQLR KQGINPGKVR KKSASLLSFG
KRIKAQDIAL FTRQMATMMK AGVPLLQSFD IIGEGFENPA MRKLVDEVKQ EVAAGNSFAA
ALRKKPQYFD ELYCNLVDAG EQSGALDTLL ERVATYKEKS ESLKAKIKKA MTYPSAVVLV
AAVVTGILLV KVVPQFQSVF SGFGAELPAF TLMVISLSEF MQQWWWAILG LLVASFFGTR
HALKKSQALR DRRDAWFLKL PLVGTLMYKS AVARFARTLS TTFAAGVPLV EALDSVAGAT
GNVVFKRAVL RIRQDVSTGM QLNFSMRSTG IFPNMAVQMT AIGEESGALD EMLDKVAGFY
EDEVDNMVDN LTSLMEPFIM VVLGVIVGGL VVAMYLPIFQ LGSAI
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