Gene Pfl01_4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4816 
Symbol 
ID3717252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5434992 
End bp5437943 
Gene Length2952 bp 
Protein Length983 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350544 
Protein GI77461037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.682777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.176654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGC ACATGCCCAA AGGATTGATT CGCGCGATTG GCGCCCTGTT GACTGCTCTG 
GCCCTCTACA GCCTGCTGGG GTTCCTGATT TTGCCGGGCA TTGCGCTCAG GGTGGTGAAT
CAGCAACTGG CCAACTACGC CACGGTGCCG GCTCATCTGC AGCGCATCGA ACTCAACCCG
TTCAGCCTTG AACTCACGCT GTGGGGCCTG GTGATCGGTG AGCCGGGCAA GGAACAGGTC
GGCTTCGAAC GGTTGTACGC CAACCTGCAA CTCGACAGCC TGTGGACCAA AGCCCTGCAT
CTGTCCGACA TCGAACTGGA AAAATCCAAA ACCGAAATCC TGTTCGCCAA GGATGGTCAG
CTCAACCTGC TCGGCCTGTT CAAGCTCCCC GCCAGCGAGC CCACCCCGGC CGATCCCGAC
GCCAAACCGT TTCCGCTGCG CATCGACCGG ATCCAGCTGG CCGGCGGCAA CCTGCATTTC
GTGGATGCGC GCCCCAGCGA ACCGATCGAA TTTCTCTACG ACAAGCTCGA CTTCGAGCTG
AAAAACCTCA GCACACTGCC CGAAGACAAC GCCGACATGA CCCTCGTCGC GATCGGCCCG
GCCGGTGGGC AGATCGACTG GAAAGGCAAC TTCAGCCTGA TCCCGATCGC TTCCGAAGGC
ACGCTCAAGA TCACCGACGG CCAGATGAAA GCCTTCTGGC CCTACGTGCG TGATGCCGTG
CCACTGGTGC TGGAAAACGG GGTCGTCAGC CTGAGCACCG ACTACAAGCT CAACCTGTCC
AAGGAAACCG AACTGCTGCT GAACAACGTG GCGGTCAATA TAGCGCCGTT CGCCATCAAG
GCGCCGGACG GACGCCCGCT GGCGAAACTC GAGCGTCTCG ACGTCAGCGA CACCACGGTG
GACCTGGCCA AGCAGCAAGT GGTGGTTGGC AAGATCCGCA GTCAGAAACT GGAAACCTGG
GCAGCCCTGG AAGCGGACGG CCAACTGGAT TGGCAAAAAC TGTTCGCCAG CCAGCCGTCG
AAACCCGCCG CAAAAGCTGC GGCGGAACCC AAAAGCACTC CGGCCGCCGC CGACTCGCCG
AAACCCGAGC CGACCGCGCC GAGCAAACCG TGGCAAGTGC TGCTCAAGGA CGTGCAACTG
CGTGACTACA AAGTGCATCT GGCCGATCGT TCGGCGAAGC CCGAAGTCAC TCTGGACGTC
ACCCCGCTGA ACGTCGATCT GCAAAACTTC GACAGCCTCA ACGGCTCACC TTTCAACCTC
AAACTCGACA CCGGCCTGGG CAAGCAAGGC AAGATCAGCG CCGACGGCGT GGTCAACCTG
GCCCCGGTCA CCGCGCAGCT CAACGTGAAA ACCCAGGACA TCGACCTGCG GGTCGCGCAG
TCCTACATCA ACCCGTTCAT TCGTCTCGAA CTGCGCAGCG GCATGCTCGG CAGCGACCTG
AAAGTGAACC TGAAAAGCAC TGACCCGCTG GCCCTCAGCG TCACCGGTCG TGCTCAGATC
GATCAGTTGC ACACCCTCGA CACCCTGAAA ACCCGCGACT TCCTCAAGTG GCAGCAAGTG
GTGGTCGAAG GCCTGAACTA TCAGCACGGC GACAGCCTGT CGATCGACAG GGTCAACCTG
TTCCAGCCGT ATGCACGGTT CATGATCAAC GATGACCGCA CCACCAACAT CGACGACCTG
CTGATCCCGC AGCAGGCCGA CTCCGGGGCG AAGACCGCTG CGGCGAAACC GGCGAGCAAT
GACAAACCAC TGGGCATTCA CATCGGTGGC ATCGCGATCA ACGACGGCTC GGCCAACTTC
GCCGACTTCA GCCTGACCCC CAACTTCGCC ACCGCGATTC AGCAGCTCAA CGGCCAGATC
GGCACCATCG ACAGCCGTCA GGCGAAACCG GCCAGCGTCG ACATCAAGGG CAAGGTCGAC
CGCTATGCAC CGGTGACCAT CAAGGGCGCG GTCAACCCGT TCGATCCGAT GGCCAGCCTC
GACATCGCCA CCAGTTTCAA ACGGGTCGAA CTGACCACCC TGACCCCCTA CTCCGGCAAG
TTCGCCGGCT ACCGGATCCG CAAGGGCCGG CTCAACCTCG ACCTGCATTA CCTGATCACC
AAAGGCCAGC TCAAGGCCGA GAACAAAGTG GTGGTCGAGC AGCTGCAACT GGGTGAGAAA
GTCGACAGCC CGGATGCCGT GAGCCTGCCG CTGAAACTGG CTATCGCCCT GCTCAAGGAC
GTCGACGGCA AGATCTCCAT CGAGCTGCCG GTCACCGGTG ACCTGAACAA CCCGCAATTC
AGCGTGATGC CGATTGTCTG GCAGACCCTG CGCAACCTGA TCGTCAAAGC CGCCGCCGCA
CCGTTCAAGC TGATTGGCGG TCTGGTCAGC GGTGGCGGCT CGGAAGACCT CGGCACCGTG
TCCTTCGCAC CGGGTTCCAG CGACCTGAGC AAAGACGCCG AAGCGGCGCT GGTGAAACTG
TCGCAAGCGC TGAAGGAGCG TCCGGCCCTG CGCCTGGAAA TCGAAGGCAC TGCGGCAAAA
AGCAGTGACG GTCCGTTGCT CGCAGAACAG CGCCTGGAAC GTGAATACCA GTACAACTAC
TACAAGATGC TCCAGCGCCG CGGCGACAAG GTGCCGGCTC AGGCTTCGCT GATCCAGGTA
CCGGAAAACG AAAAAGGTCC GCTGCTTGAA GGCATCTATC GCACTCGCCT GAAAACCCAG
CCACCGGCCG AGTGGAAGGA TCTGGGCAAG GAAGAACGCA CCGCGAAAAT GCGCGCCGAC
GTGATCAAGT TCTGGAGCTC CAGCGACGTG CTGCTGCGCC AGCTCGGTCA GGACCGGGCC
AGCAGCATCA AGGACTATCT GGTGGACAAG GGCCAACTGG CCGACGATCG CGTGTACTTC
ATCGACGCCA ATCTCGGCGA AGCGGAGAGC GACGGCCGGG TGGTGACGCA AATGCATCTG
GATGCCGAGT GA
 
Protein sequence
MKPHMPKGLI RAIGALLTAL ALYSLLGFLI LPGIALRVVN QQLANYATVP AHLQRIELNP 
FSLELTLWGL VIGEPGKEQV GFERLYANLQ LDSLWTKALH LSDIELEKSK TEILFAKDGQ
LNLLGLFKLP ASEPTPADPD AKPFPLRIDR IQLAGGNLHF VDARPSEPIE FLYDKLDFEL
KNLSTLPEDN ADMTLVAIGP AGGQIDWKGN FSLIPIASEG TLKITDGQMK AFWPYVRDAV
PLVLENGVVS LSTDYKLNLS KETELLLNNV AVNIAPFAIK APDGRPLAKL ERLDVSDTTV
DLAKQQVVVG KIRSQKLETW AALEADGQLD WQKLFASQPS KPAAKAAAEP KSTPAAADSP
KPEPTAPSKP WQVLLKDVQL RDYKVHLADR SAKPEVTLDV TPLNVDLQNF DSLNGSPFNL
KLDTGLGKQG KISADGVVNL APVTAQLNVK TQDIDLRVAQ SYINPFIRLE LRSGMLGSDL
KVNLKSTDPL ALSVTGRAQI DQLHTLDTLK TRDFLKWQQV VVEGLNYQHG DSLSIDRVNL
FQPYARFMIN DDRTTNIDDL LIPQQADSGA KTAAAKPASN DKPLGIHIGG IAINDGSANF
ADFSLTPNFA TAIQQLNGQI GTIDSRQAKP ASVDIKGKVD RYAPVTIKGA VNPFDPMASL
DIATSFKRVE LTTLTPYSGK FAGYRIRKGR LNLDLHYLIT KGQLKAENKV VVEQLQLGEK
VDSPDAVSLP LKLAIALLKD VDGKISIELP VTGDLNNPQF SVMPIVWQTL RNLIVKAAAA
PFKLIGGLVS GGGSEDLGTV SFAPGSSDLS KDAEAALVKL SQALKERPAL RLEIEGTAAK
SSDGPLLAEQ RLEREYQYNY YKMLQRRGDK VPAQASLIQV PENEKGPLLE GIYRTRLKTQ
PPAEWKDLGK EERTAKMRAD VIKFWSSSDV LLRQLGQDRA SSIKDYLVDK GQLADDRVYF
IDANLGEAES DGRVVTQMHL DAE