Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4816 |
Symbol | |
ID | 3717252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5434992 |
End bp | 5437943 |
Gene Length | 2952 bp |
Protein Length | 983 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350544 |
Protein GI | 77461037 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.682777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.176654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGC ACATGCCCAA AGGATTGATT CGCGCGATTG GCGCCCTGTT GACTGCTCTG GCCCTCTACA GCCTGCTGGG GTTCCTGATT TTGCCGGGCA TTGCGCTCAG GGTGGTGAAT CAGCAACTGG CCAACTACGC CACGGTGCCG GCTCATCTGC AGCGCATCGA ACTCAACCCG TTCAGCCTTG AACTCACGCT GTGGGGCCTG GTGATCGGTG AGCCGGGCAA GGAACAGGTC GGCTTCGAAC GGTTGTACGC CAACCTGCAA CTCGACAGCC TGTGGACCAA AGCCCTGCAT CTGTCCGACA TCGAACTGGA AAAATCCAAA ACCGAAATCC TGTTCGCCAA GGATGGTCAG CTCAACCTGC TCGGCCTGTT CAAGCTCCCC GCCAGCGAGC CCACCCCGGC CGATCCCGAC GCCAAACCGT TTCCGCTGCG CATCGACCGG ATCCAGCTGG CCGGCGGCAA CCTGCATTTC GTGGATGCGC GCCCCAGCGA ACCGATCGAA TTTCTCTACG ACAAGCTCGA CTTCGAGCTG AAAAACCTCA GCACACTGCC CGAAGACAAC GCCGACATGA CCCTCGTCGC GATCGGCCCG GCCGGTGGGC AGATCGACTG GAAAGGCAAC TTCAGCCTGA TCCCGATCGC TTCCGAAGGC ACGCTCAAGA TCACCGACGG CCAGATGAAA GCCTTCTGGC CCTACGTGCG TGATGCCGTG CCACTGGTGC TGGAAAACGG GGTCGTCAGC CTGAGCACCG ACTACAAGCT CAACCTGTCC AAGGAAACCG AACTGCTGCT GAACAACGTG GCGGTCAATA TAGCGCCGTT CGCCATCAAG GCGCCGGACG GACGCCCGCT GGCGAAACTC GAGCGTCTCG ACGTCAGCGA CACCACGGTG GACCTGGCCA AGCAGCAAGT GGTGGTTGGC AAGATCCGCA GTCAGAAACT GGAAACCTGG GCAGCCCTGG AAGCGGACGG CCAACTGGAT TGGCAAAAAC TGTTCGCCAG CCAGCCGTCG AAACCCGCCG CAAAAGCTGC GGCGGAACCC AAAAGCACTC CGGCCGCCGC CGACTCGCCG AAACCCGAGC CGACCGCGCC GAGCAAACCG TGGCAAGTGC TGCTCAAGGA CGTGCAACTG CGTGACTACA AAGTGCATCT GGCCGATCGT TCGGCGAAGC CCGAAGTCAC TCTGGACGTC ACCCCGCTGA ACGTCGATCT GCAAAACTTC GACAGCCTCA ACGGCTCACC TTTCAACCTC AAACTCGACA CCGGCCTGGG CAAGCAAGGC AAGATCAGCG CCGACGGCGT GGTCAACCTG GCCCCGGTCA CCGCGCAGCT CAACGTGAAA ACCCAGGACA TCGACCTGCG GGTCGCGCAG TCCTACATCA ACCCGTTCAT TCGTCTCGAA CTGCGCAGCG GCATGCTCGG CAGCGACCTG AAAGTGAACC TGAAAAGCAC TGACCCGCTG GCCCTCAGCG TCACCGGTCG TGCTCAGATC GATCAGTTGC ACACCCTCGA CACCCTGAAA ACCCGCGACT TCCTCAAGTG GCAGCAAGTG GTGGTCGAAG GCCTGAACTA TCAGCACGGC GACAGCCTGT CGATCGACAG GGTCAACCTG TTCCAGCCGT ATGCACGGTT CATGATCAAC GATGACCGCA CCACCAACAT CGACGACCTG CTGATCCCGC AGCAGGCCGA CTCCGGGGCG AAGACCGCTG CGGCGAAACC GGCGAGCAAT GACAAACCAC TGGGCATTCA CATCGGTGGC ATCGCGATCA ACGACGGCTC GGCCAACTTC GCCGACTTCA GCCTGACCCC CAACTTCGCC ACCGCGATTC AGCAGCTCAA CGGCCAGATC GGCACCATCG ACAGCCGTCA GGCGAAACCG GCCAGCGTCG ACATCAAGGG CAAGGTCGAC CGCTATGCAC CGGTGACCAT CAAGGGCGCG GTCAACCCGT TCGATCCGAT GGCCAGCCTC GACATCGCCA CCAGTTTCAA ACGGGTCGAA CTGACCACCC TGACCCCCTA CTCCGGCAAG TTCGCCGGCT ACCGGATCCG CAAGGGCCGG CTCAACCTCG ACCTGCATTA CCTGATCACC AAAGGCCAGC TCAAGGCCGA GAACAAAGTG GTGGTCGAGC AGCTGCAACT GGGTGAGAAA GTCGACAGCC CGGATGCCGT GAGCCTGCCG CTGAAACTGG CTATCGCCCT GCTCAAGGAC GTCGACGGCA AGATCTCCAT CGAGCTGCCG GTCACCGGTG ACCTGAACAA CCCGCAATTC AGCGTGATGC CGATTGTCTG GCAGACCCTG CGCAACCTGA TCGTCAAAGC CGCCGCCGCA CCGTTCAAGC TGATTGGCGG TCTGGTCAGC GGTGGCGGCT CGGAAGACCT CGGCACCGTG TCCTTCGCAC CGGGTTCCAG CGACCTGAGC AAAGACGCCG AAGCGGCGCT GGTGAAACTG TCGCAAGCGC TGAAGGAGCG TCCGGCCCTG CGCCTGGAAA TCGAAGGCAC TGCGGCAAAA AGCAGTGACG GTCCGTTGCT CGCAGAACAG CGCCTGGAAC GTGAATACCA GTACAACTAC TACAAGATGC TCCAGCGCCG CGGCGACAAG GTGCCGGCTC AGGCTTCGCT GATCCAGGTA CCGGAAAACG AAAAAGGTCC GCTGCTTGAA GGCATCTATC GCACTCGCCT GAAAACCCAG CCACCGGCCG AGTGGAAGGA TCTGGGCAAG GAAGAACGCA CCGCGAAAAT GCGCGCCGAC GTGATCAAGT TCTGGAGCTC CAGCGACGTG CTGCTGCGCC AGCTCGGTCA GGACCGGGCC AGCAGCATCA AGGACTATCT GGTGGACAAG GGCCAACTGG CCGACGATCG CGTGTACTTC ATCGACGCCA ATCTCGGCGA AGCGGAGAGC GACGGCCGGG TGGTGACGCA AATGCATCTG GATGCCGAGT GA
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Protein sequence | MKPHMPKGLI RAIGALLTAL ALYSLLGFLI LPGIALRVVN QQLANYATVP AHLQRIELNP FSLELTLWGL VIGEPGKEQV GFERLYANLQ LDSLWTKALH LSDIELEKSK TEILFAKDGQ LNLLGLFKLP ASEPTPADPD AKPFPLRIDR IQLAGGNLHF VDARPSEPIE FLYDKLDFEL KNLSTLPEDN ADMTLVAIGP AGGQIDWKGN FSLIPIASEG TLKITDGQMK AFWPYVRDAV PLVLENGVVS LSTDYKLNLS KETELLLNNV AVNIAPFAIK APDGRPLAKL ERLDVSDTTV DLAKQQVVVG KIRSQKLETW AALEADGQLD WQKLFASQPS KPAAKAAAEP KSTPAAADSP KPEPTAPSKP WQVLLKDVQL RDYKVHLADR SAKPEVTLDV TPLNVDLQNF DSLNGSPFNL KLDTGLGKQG KISADGVVNL APVTAQLNVK TQDIDLRVAQ SYINPFIRLE LRSGMLGSDL KVNLKSTDPL ALSVTGRAQI DQLHTLDTLK TRDFLKWQQV VVEGLNYQHG DSLSIDRVNL FQPYARFMIN DDRTTNIDDL LIPQQADSGA KTAAAKPASN DKPLGIHIGG IAINDGSANF ADFSLTPNFA TAIQQLNGQI GTIDSRQAKP ASVDIKGKVD RYAPVTIKGA VNPFDPMASL DIATSFKRVE LTTLTPYSGK FAGYRIRKGR LNLDLHYLIT KGQLKAENKV VVEQLQLGEK VDSPDAVSLP LKLAIALLKD VDGKISIELP VTGDLNNPQF SVMPIVWQTL RNLIVKAAAA PFKLIGGLVS GGGSEDLGTV SFAPGSSDLS KDAEAALVKL SQALKERPAL RLEIEGTAAK SSDGPLLAEQ RLEREYQYNY YKMLQRRGDK VPAQASLIQV PENEKGPLLE GIYRTRLKTQ PPAEWKDLGK EERTAKMRAD VIKFWSSSDV LLRQLGQDRA SSIKDYLVDK GQLADDRVYF IDANLGEAES DGRVVTQMHL DAE
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